Gene Hoch_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0257 
Symbol 
ID8542636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp379315 
End bp380649 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content69% 
IMG OID646385053 
Productacetyl-CoA carboxylase, biotin carboxylase 
Protein accessionYP_003264791 
Protein GI262193582 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCA AGGTCTTAGT CGCGAACCGT GGTGAGATCG CGCTGCGCAT CATCCGGGCG 
CTGCGCGAGC TGGGCATCCG CTCGGTCGCC GTGCACTCCG AAGCCGACGC CAGCGCCCTA
CACGTCAAAT TCGCCGACGA GAAGGTGTGC ATCGGCCCCG CGCCCTCGGC GCGCAGCTAT
CTCGCCGTGC CCTCGATCAT CAGCGCCGCC GAGATCACGC GCGCCGACGC CATCCACCCC
GGCTACGGCT TCCTCGCCGA GGACCCCGAA TTCGCCGAGG TCTGCGAGAA GTGCGACATC
CAGTGGATCG GACCGCGGCC CGACTCGATG CGGCTCATGG GCGACAAGAT CCGCGCCCGC
GAGGCCATGG CCAAGGCCGG CGTGCCCGTG CTGCCGGGCT CGGGCGCCAT CAACACAGAG
GCCGAGCTGC ACCAGGCGGT CGAGCAGATC GGCTTCCCCC TGATCCTCAA AGCGGCGGCC
GGTGGCGGCG GGCGCGGCAT GAAGATCGTG CGTGAGCCCG GCCGTCTGGT CGCCGACTGG
AGCCTGGCGC GCACCGAGGC GCAGGCCGCG TTCGGCAATC CGGACATGTA CGCCGAGCGC
TACTGCGAGC GGCCGCGGCA CATCGAGATC CAGGTCGTCG CCGACCACCA CGGCACCGCG
GCCCATCTCG GCGAGCGCGA GTGCTCGGTG CAGCGGCGCC ATCAGAAGGT CGTCGAGGAG
GCGCCCGCGG CCTCGCTCGA CAGCGACATC CGCGATCAGA TGACCGACGC GGCGCTCAAA
GCGGTGCGCG CGATCGGCTA CCGCAACCTG GGCACCCTGG AGTTTCTGCT CGACGAGGAC
GGGCAGTTCT ACTTCATGGA GATGAACACG CGGCTCCAGG TCGAGCATCC CGTGACCGAG
CTGATCACGG GCGTAGACCT GGTGCGCGAG CAGATCCGCA TCGCGGCCGG CGAGCGGCTG
TCATTCGGCA CGCGGCGCCC GCGCGGACAC GCGATCGAGC TGCGCATCAA CGCCGAGGAT
CCCGAGACAT TTGCGCCGTG GCCGGGCAAG ATCACGGGCC TCAACCTGCC CGGCGGTCTC
GGCGTGCGCG TCGACACCCA TATCTACGAC GGCTACGTGG TGCCCCCGCA CTACGACTCG
CTGCTGGCCA AACTCGTCGT CCACGACGAC ACCCGCGAGG CCGCGTTGCG ACGCGCGCGC
CGCTGCCTCG AAGAATTCGT GGTCGAGGGG ATCCGCACCA ATCTGGCCTT CCATCGGCGC
ATCATCGACC ATCCGGAATT CCAGGCCGGC CGCTACGATA CTGGCTTCGT CGCGCGCTTG
CTCGCTGGCA AATGA
 
Protein sequence
MFRKVLVANR GEIALRIIRA LRELGIRSVA VHSEADASAL HVKFADEKVC IGPAPSARSY 
LAVPSIISAA EITRADAIHP GYGFLAEDPE FAEVCEKCDI QWIGPRPDSM RLMGDKIRAR
EAMAKAGVPV LPGSGAINTE AELHQAVEQI GFPLILKAAA GGGGRGMKIV REPGRLVADW
SLARTEAQAA FGNPDMYAER YCERPRHIEI QVVADHHGTA AHLGERECSV QRRHQKVVEE
APAASLDSDI RDQMTDAALK AVRAIGYRNL GTLEFLLDED GQFYFMEMNT RLQVEHPVTE
LITGVDLVRE QIRIAAGERL SFGTRRPRGH AIELRINAED PETFAPWPGK ITGLNLPGGL
GVRVDTHIYD GYVVPPHYDS LLAKLVVHDD TREAALRRAR RCLEEFVVEG IRTNLAFHRR
IIDHPEFQAG RYDTGFVARL LAGK