Gene Hoch_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0255 
Symbol 
ID8542634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp378101 
End bp378655 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID646385051 
Product3-dehydroquinate dehydratase, type II 
Protein accessionYP_003264789 
Protein GI262193580 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC CGAGCGATCG CGCCGCGGAC GCCGCGGCAC CGCTGCGGAT CCTGGTCCTG 
CACGGGCCCA ACCTCAACTT GCTCGGCACC CGCGCGCCCG AGATCTACGG CAGCACCACG
CTGGCCGAAA TCGATGCCAG CCTGCGCCAG CGCGCAGCCG CGGCCGGGGC ACAGCTCGAT
AGCGCGCAGA GCAACCACGA GGGCCAACTG GTCGATCACA TCCAGGCTGC TGCGTCGCGT
TACGACGCCA TCGTGATCAA CCCGGCCGCG TATACCCACA CCAGCATCGC CATTCGCGAT
GCCATCGAGG CGGTGGGGCT GCCGGTGGTG GAAGTCCACC TGTCCAACAT CCACGCCCGC
GAGAGCTTCC GCCATCACTC GATGACGGCG GCGCGCTGCG TCGGTCAGAT CTGCGGCTTC
GGCGCGCAAA GCTACGAACT GGGGCTGGAC GCTGCCCTCG CTCATGTGAA AGGGTTGCGC
GAGCGACGCG GTCGCGAACG CGAGCGACGC GATTCCGAAC GCGAACGACG CGCTCGCGAT
TCCGAAAGCG AATGA
 
Protein sequence
MSAPSDRAAD AAAPLRILVL HGPNLNLLGT RAPEIYGSTT LAEIDASLRQ RAAAAGAQLD 
SAQSNHEGQL VDHIQAAASR YDAIVINPAA YTHTSIAIRD AIEAVGLPVV EVHLSNIHAR
ESFRHHSMTA ARCVGQICGF GAQSYELGLD AALAHVKGLR ERRGRERERR DSERERRARD
SESE