| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0247 |
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| Symbol | |
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| ID | 8542626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 367445 |
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| End bp | 368926 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385043 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003264781 |
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| Protein GI | 262193572 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTGG ATCGCGACGC CGCTTCACGC GATGAACTGC AACACGCGCT GAGCGCGCAA
GGATGCCGCG TGACCGCGGT GGATGACGGC CGCGCGGCGA AGGTCGAGCT GGCCGCGCAG
TCCTTCGACG CCGTGTTCTG CTCGGTGTCC GAGACCGAGG CCCTGGCCGG CGACGCCGCG
GCGATTCCGC GCGTGGCCAC GCTGCCGCGC GGCGCCTTGC GCGAGGGCAT GGAGGCGGTC
GCGAGCGGGC TGGCGTGCGA CTGTCTGGTG GTCCCGGCGT CGGCCGACGA GGTCGCCATG
GCGCTGCTGC GCGCGGCCCG TCTGGCGCCG CTGCTGGGGG CCGCTGCTGC GGCGCCCGCA
CAGGCACAGC GCGACGACGC GAGCGACGAC GCCCAGCAGG GCACGGGCGA GACGGGCGCG
GCCCGCGACG CTCAGCCCGC TCGCCGACGC CCGCGGGCCA AACTGGTTGT GGTCGGCGGC
ATGGTCGGCG CCAGCGCCGC CATCAAAGAT GTCTTCGCCA CCATCGACAA GGTCGCGCGC
CACAAGGCTG CGGTCCTCAT CACGGGCGAG AGCGGCACCG GCAAGGAGCT GGTGGCCCGC
GCCATCCACG ACGCCAGCCA GCGCAAGGGC AAGAACTTCG TCGCCATCAA CTGCGGCGCC
ATCCCGGCCA ATCTGCTCGA GTCGGAGCTC TTCGGCTATC GCCGCGGCGC CTTCACCGAC
GCCGTGCGCG ACAAGACCGG GCTGTTCGAG GTCGCCGACG GCGGCACCTT ATTCCTGGAC
GAGATCGGCG AGCTGCCGCT CAACCTCCAG GTCAAGCTGC TGCGCGTCCT CCAGGAGGAG
GAGATCCGGC GCATCGGCGA CAACCGCACC ACCAAGATCG ATGTGCGCAT CGTCGCCGCG
ACCCTGCGCA ATCTGGGCGA GGACGCCGAG AACGGCCGCT TCCGCGAGGA CCTGTTCTAC
CGCCTCAACG TGCTCAACAT CGTGCTGCCA GCGCTGCGCG AGCGCCGCGC CGATATCGCC
CCGCTGGCCG AGCACTTCGT CGCCGCCTAT CGCAAGCGCC ACAAGAGCTC CCAGCCGCGC
GCCGAAGGCA TCAGCGAGGC GGCCATGGGC CTGCTCGAGG CCTACGCGTG GCCGGGCAAC
ATCCGCGAGC TCGAGAACAC CATCGAACGC GCCATGGTGC TCGCCGATGG CCCGCTGATC
GAGCCGCATC TGCTCGACGC CAAAATCGCG CAGTTCGCGC CGGCCGGTGC CGCTCAGACC
GCCCCCGCGG CCTCGGCATC CGCGTCCGAC GAGGACCTTC GCTCGGTCGC CATCGCGCTC
GACGGCGATG ACTTATCGAT CAAAAAGCAC ACCCGCTTGT TCGAGGAGCG ACTCGTCCGG
ATTGCACTCG GCAAAACCGA TGGCAATCGC CACAACGCGT CGAAATTGCT CGGTATCAGC
TATCGAGCAC TCTTATATAA GATCAAAGAA TATGGAATTT GA
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| Protein sequence | MVVDRDAASR DELQHALSAQ GCRVTAVDDG RAAKVELAAQ SFDAVFCSVS ETEALAGDAA
AIPRVATLPR GALREGMEAV ASGLACDCLV VPASADEVAM ALLRAARLAP LLGAAAAAPA
QAQRDDASDD AQQGTGETGA ARDAQPARRR PRAKLVVVGG MVGASAAIKD VFATIDKVAR
HKAAVLITGE SGTGKELVAR AIHDASQRKG KNFVAINCGA IPANLLESEL FGYRRGAFTD
AVRDKTGLFE VADGGTLFLD EIGELPLNLQ VKLLRVLQEE EIRRIGDNRT TKIDVRIVAA
TLRNLGEDAE NGRFREDLFY RLNVLNIVLP ALRERRADIA PLAEHFVAAY RKRHKSSQPR
AEGISEAAMG LLEAYAWPGN IRELENTIER AMVLADGPLI EPHLLDAKIA QFAPAGAAQT
APAASASASD EDLRSVAIAL DGDDLSIKKH TRLFEERLVR IALGKTDGNR HNASKLLGIS
YRALLYKIKE YGI
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