Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0247 |
Symbol | |
ID | 8542626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 367445 |
End bp | 368926 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646385043 |
Product | sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_003264781 |
Protein GI | 262193572 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGTGG ATCGCGACGC CGCTTCACGC GATGAACTGC AACACGCGCT GAGCGCGCAA GGATGCCGCG TGACCGCGGT GGATGACGGC CGCGCGGCGA AGGTCGAGCT GGCCGCGCAG TCCTTCGACG CCGTGTTCTG CTCGGTGTCC GAGACCGAGG CCCTGGCCGG CGACGCCGCG GCGATTCCGC GCGTGGCCAC GCTGCCGCGC GGCGCCTTGC GCGAGGGCAT GGAGGCGGTC GCGAGCGGGC TGGCGTGCGA CTGTCTGGTG GTCCCGGCGT CGGCCGACGA GGTCGCCATG GCGCTGCTGC GCGCGGCCCG TCTGGCGCCG CTGCTGGGGG CCGCTGCTGC GGCGCCCGCA CAGGCACAGC GCGACGACGC GAGCGACGAC GCCCAGCAGG GCACGGGCGA GACGGGCGCG GCCCGCGACG CTCAGCCCGC TCGCCGACGC CCGCGGGCCA AACTGGTTGT GGTCGGCGGC ATGGTCGGCG CCAGCGCCGC CATCAAAGAT GTCTTCGCCA CCATCGACAA GGTCGCGCGC CACAAGGCTG CGGTCCTCAT CACGGGCGAG AGCGGCACCG GCAAGGAGCT GGTGGCCCGC GCCATCCACG ACGCCAGCCA GCGCAAGGGC AAGAACTTCG TCGCCATCAA CTGCGGCGCC ATCCCGGCCA ATCTGCTCGA GTCGGAGCTC TTCGGCTATC GCCGCGGCGC CTTCACCGAC GCCGTGCGCG ACAAGACCGG GCTGTTCGAG GTCGCCGACG GCGGCACCTT ATTCCTGGAC GAGATCGGCG AGCTGCCGCT CAACCTCCAG GTCAAGCTGC TGCGCGTCCT CCAGGAGGAG GAGATCCGGC GCATCGGCGA CAACCGCACC ACCAAGATCG ATGTGCGCAT CGTCGCCGCG ACCCTGCGCA ATCTGGGCGA GGACGCCGAG AACGGCCGCT TCCGCGAGGA CCTGTTCTAC CGCCTCAACG TGCTCAACAT CGTGCTGCCA GCGCTGCGCG AGCGCCGCGC CGATATCGCC CCGCTGGCCG AGCACTTCGT CGCCGCCTAT CGCAAGCGCC ACAAGAGCTC CCAGCCGCGC GCCGAAGGCA TCAGCGAGGC GGCCATGGGC CTGCTCGAGG CCTACGCGTG GCCGGGCAAC ATCCGCGAGC TCGAGAACAC CATCGAACGC GCCATGGTGC TCGCCGATGG CCCGCTGATC GAGCCGCATC TGCTCGACGC CAAAATCGCG CAGTTCGCGC CGGCCGGTGC CGCTCAGACC GCCCCCGCGG CCTCGGCATC CGCGTCCGAC GAGGACCTTC GCTCGGTCGC CATCGCGCTC GACGGCGATG ACTTATCGAT CAAAAAGCAC ACCCGCTTGT TCGAGGAGCG ACTCGTCCGG ATTGCACTCG GCAAAACCGA TGGCAATCGC CACAACGCGT CGAAATTGCT CGGTATCAGC TATCGAGCAC TCTTATATAA GATCAAAGAA TATGGAATTT GA
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Protein sequence | MVVDRDAASR DELQHALSAQ GCRVTAVDDG RAAKVELAAQ SFDAVFCSVS ETEALAGDAA AIPRVATLPR GALREGMEAV ASGLACDCLV VPASADEVAM ALLRAARLAP LLGAAAAAPA QAQRDDASDD AQQGTGETGA ARDAQPARRR PRAKLVVVGG MVGASAAIKD VFATIDKVAR HKAAVLITGE SGTGKELVAR AIHDASQRKG KNFVAINCGA IPANLLESEL FGYRRGAFTD AVRDKTGLFE VADGGTLFLD EIGELPLNLQ VKLLRVLQEE EIRRIGDNRT TKIDVRIVAA TLRNLGEDAE NGRFREDLFY RLNVLNIVLP ALRERRADIA PLAEHFVAAY RKRHKSSQPR AEGISEAAMG LLEAYAWPGN IRELENTIER AMVLADGPLI EPHLLDAKIA QFAPAGAAQT APAASASASD EDLRSVAIAL DGDDLSIKKH TRLFEERLVR IALGKTDGNR HNASKLLGIS YRALLYKIKE YGI
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