| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0237 |
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| Symbol | |
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| ID | 8542616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 352310 |
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| End bp | 355264 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646385033 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003264771 |
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| Protein GI | 262193562 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT TTGCCCGCCG ACCCACGATC GATGAGATCG AGCAACTCAG GGCCCAGGTC
AGGAGAGAGC CGGGCTCGCC CGCCTTCGTC CGCCTCGGCG AGGCCTACCT CGCCCTCGGC
CGTCCCCAGG ACGCGATCGA GGTCGGCGTT CCCGGCCTGC GCGACAACCC CGACAGCACC
GCCGGCCGCA TGATGATCGG CCGCGCCTAC GTCATGCAGC ACCAGTGGAA GGAGGCGCAG
GACGAGCTAC TGCGCCTGGT CAAAGCCGAC CGCAACCACG CCGCTGGCTT TGCGCTGCTC
GGCGAGGTGC TGCTGCGCCG CCAGGATCTC AAGCGCGCGC TGCCGGTGTT GCAGCACGCC
CAGAACCTCA ACCCGACCAA TCCCTACGTC GAGGATCTGC TCAAGCGCGC GCGCACCGGA
CGCGCTCCCG ACCCGCCGCC GCCGCCGCCG GTGCCGCAGG ATCCCCAGCC CGCGGCCGCG
CCCTACGCCA GCGCCAGCGC GCACAACGAT CCCCTGCAGT TCGGCGTCGA CGAGCCCACG
CGCGTGGCCG GCGACATGAG CAGCGGCCTC ACCCCGCCGC CCGCGGCCGC CCCGCACGGG
CACGCGCCGC AGTATCCCGG CCATCAATCC GCGCCCGCGC CCGCCCCGGC GCCGCGGCCC
AGGCAGCAGC AACAGGCGAT CACCGATCCC GGCGCCAAGA CCATCATGGC CGGCGCCGCG
CCCGCGGCCG AGTCCAAGCC GCCGTCGCCG CGTCCGATCC CGCGGGCCCT GGCCCAGCCC
GCCCCCCAAG CGGCGCCCGC GCCCGCGCCC GCGCCCAAGG CCGAGCCCGA AACGAAGAAG
AAGCCCAAGG TCGCGGCCGC CGACATGCCG CCGCCGGGAC CGCCGACGGG CGTGCGTCCT
CGCATCCTGT CGATGGACAA GCCCACCGAC GCCGCGCGCG AGGCCATGCA TCAGGCCGCC
GACGTCGGCG ATTACCTCAA CGCCCTGCTC ACCCAGGGGC TGCTCAACGT GCCCGCCGTG
CAGGCGCAGC ACACGCCCCA CGCCTACCGC AGCGGCAAAC GCTGGGGCCA CTCGGTCACG
CGCACCTTCG TGTTCCTCTT CGTGCTGCTG GCCGTGGGAC TCGGCGGCGG CGCCTTCTGG
ATCTACCAGA CCGAGCAGCA GCGCGAAGAA GAGGTCGCCC GGCACATCGC CAGGGCCGAC
ACCCTGCTGA CCACGGGCAC CTACAACGAC GTGCAGGAGG CGCGCGAGGC CACGGCCAGC
GCGCTCAGGC GCGACCCGGC CAGCGTCAGC GCCATGGCCA AGTTCGCGCG TGTCGAGACC
GCGGCCGCCC TGCTCTACGG CACCCCGGCG GCCAAGGGCA CCTCGGCCAT GCTGCGGGCC
CGCAAGGAGC TCACCGAGGA AGACGCGGCC TGGGCCGACA TCGTCTTCGC CGAGATCGCC
AGCACCCTGG CCACGCTCAG CGACGAAGCC GCGGGCGCGC CTCAGGAGCG GCTCGGCGAC
GCGCGCAAGA CCGCGGACGC CTGGCTCGAG AAGCATCCCG ACGACGCCTG GGTGCGCTGG
CTCAGCGGCG TGGCCATGCT CTACGCCAAC GACCTCAGCG GCGCGGCCGA GGCCTTCGAA
GCCGCCGAGG CCGACGGCGA GGGCCCGGTG GTCGCCAGCA TCTACCGCGC CGACATGCAG
ACCGACGCCG GCGAGCTCGA CGGCGCGTCC GTGCGCTACG AGGCCGCGCT CGAGCGCGCG
CCCAAGCATC CGCTGGCCAT CATCGGCAAC GCCCTGGTGC AGCTCGCGCG CGCCGAAGAG
GCCGCCGTGG TGCTTGGCAA GATCAACACC ACCATGACCG AGGACGAGGG CCCGCGGGCC
AACGCCTACC GCGCCCTGGT GTTTGCCCTG GCCTATCTGT GGGTGGCCTG GGATTACGAT
CAGTTCACCG AGAACCTGGC CAAGGCCGAG GGCGTGGCCG AGCCGCGCTT CCTCGGACGC
GTGGCCCTGG CGCAGCTCGC CAACGGCCAG TTCGCGGCCG CTGGCGACAC CCGCAACCGC
ATCGTCTGGT ACGTCGCCGA GCCCGAGCAG ACCCACCCCG TGGTGGCCGC GGTCGACGCC
GAGTTGCAGT GGAGTTCGGG CCTGTCGGCG CCCGCCATCG AGCAGGTCGG CGACAGCGAG
AACATCCGCG CCCGGCACCT GGTCGGCCGC GCGCTCTTCG ATCTCGGACG CCTGGACGAA
TCCGAGAAGG CCTTCGCCGA GATCCTCGAA TTTGCGCCCG AGGACTGGGA GGCGCAGACC
TGGCACGCGG CCGCGCAGCT CGCCCAGGCC AAGGGTCGGG CGCGCAACGA ATTCGACGAG
ACCCTGCAGC AGATCGCGCG CACCCAGTCC AACCAGGTGG TGCGCTACGT GCGCGGCCTG
GCCTGGCAGC GCTCGGGCGA CATGCGCGAG GCGCGCCGAC ACTTCGAGGA GTCGCTCGAG
GGCGTCGCCG ACGAGATCAC CGAGTTGGCC GAGGAGCGCG CCAACTCGAT GGCGTATCGC
GCGCACGCGG CGCTGGCCGA GCTCGACCTC GACGCTGGCA GCACTGACAA AGCCGTCGCC
CATCTCGAGC GCGCCGTGGC GCTCAACCCC GCGTATCTGC CGGCCATGGC CTTGCTCGGT
CGCGTGCAGG TGCAGCGCGG CCAGCACGCC GAGGCCGCGG CCACGCTCAA GCCGCTGCTC
GAGGAGCCCG AGATCGCCAA CGCCGCCGTG GAGCTGGCCT ACGCCGAAGC CCTGGTCGGC
GGCGGATCGC CCTCGGACGA GGCCCGCGGC CAGGCCCGCG AGGCCGTGTT GCGGGCCAAG
GACAAGGGCG CCTCGGCCGA GGAGCTGGGC CGCGTCGCCG CCCTGGTCGA CGAGACCCTG
GCCACCGAGA TCGGCGCTGG CGGCGCCGAA GAGAAGCCGA GTCGGCGTCG CGGGCGTCGT
CGCGGCCGCC GCTGA
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| Protein sequence | MSDFARRPTI DEIEQLRAQV RREPGSPAFV RLGEAYLALG RPQDAIEVGV PGLRDNPDST
AGRMMIGRAY VMQHQWKEAQ DELLRLVKAD RNHAAGFALL GEVLLRRQDL KRALPVLQHA
QNLNPTNPYV EDLLKRARTG RAPDPPPPPP VPQDPQPAAA PYASASAHND PLQFGVDEPT
RVAGDMSSGL TPPPAAAPHG HAPQYPGHQS APAPAPAPRP RQQQQAITDP GAKTIMAGAA
PAAESKPPSP RPIPRALAQP APQAAPAPAP APKAEPETKK KPKVAAADMP PPGPPTGVRP
RILSMDKPTD AAREAMHQAA DVGDYLNALL TQGLLNVPAV QAQHTPHAYR SGKRWGHSVT
RTFVFLFVLL AVGLGGGAFW IYQTEQQREE EVARHIARAD TLLTTGTYND VQEAREATAS
ALRRDPASVS AMAKFARVET AAALLYGTPA AKGTSAMLRA RKELTEEDAA WADIVFAEIA
STLATLSDEA AGAPQERLGD ARKTADAWLE KHPDDAWVRW LSGVAMLYAN DLSGAAEAFE
AAEADGEGPV VASIYRADMQ TDAGELDGAS VRYEAALERA PKHPLAIIGN ALVQLARAEE
AAVVLGKINT TMTEDEGPRA NAYRALVFAL AYLWVAWDYD QFTENLAKAE GVAEPRFLGR
VALAQLANGQ FAAAGDTRNR IVWYVAEPEQ THPVVAAVDA ELQWSSGLSA PAIEQVGDSE
NIRARHLVGR ALFDLGRLDE SEKAFAEILE FAPEDWEAQT WHAAAQLAQA KGRARNEFDE
TLQQIARTQS NQVVRYVRGL AWQRSGDMRE ARRHFEESLE GVADEITELA EERANSMAYR
AHAALAELDL DAGSTDKAVA HLERAVALNP AYLPAMALLG RVQVQRGQHA EAAATLKPLL
EEPEIANAAV ELAYAEALVG GGSPSDEARG QAREAVLRAK DKGASAEELG RVAALVDETL
ATEIGAGGAE EKPSRRRGRR RGRR
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