| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0228 |
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| Symbol | |
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| ID | 8542607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 336186 |
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| End bp | 338681 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646385024 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_003264762 |
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| Protein GI | 262193553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAG ATTCGTCAAC TCCCGAACCG CAGGTCGCCG TTCGCGTGGA GGATGCGCGC
ACCGGCATGA GCCACGAGGC GCTCAAGCGA GCGGTGCTCG ACCATCTGCT GTACACGCGC
GCCAAGACCC CGCGCACGGC CTCGCCGCTG GATATCTATT TCGCCGTGGC CCACGCGGTC
CGCGATCGCT TGACGAAGCG CTGGCTGCGC ACGCAGCGCC ACTACGTGGA GCTCGACCCC
AAACGCAGCT TTTACCTGTC CGCCGAGTTC CTGCTCGGCC GGCTGCTCAG TCACAACCTG
ATGAACCTGG GCGCCTACGA TTACGCGGTC TCCGAGCTGG CGCGCTACAA CGTGGATCTC
GCCGAGATCC TCGAGCAGGA GCCCGATCCC GGCCTGGGCA ACGGCGGCCT GGGGCGCCTG
GCCGCGTGTT TCCTCGACTC CATGGCCACC CAGGCGCTGC CCGGTATGGG CTACGGCATC
CGCTACGAGT TCGGCATCTT CCGCCAGGAG ATCGAAGGCG GGCGACAGGT CGAACAACCT
GACGAGTGGC TGCGCTACGG CAACCCGTGG GAGATCGCGC GCCCCGATAT CGCGGTCAAG
GTGCGCTTCG GCGGCTACGT GCAGCAGTCG GTGCAGCCCG ACGGCAGCCA GCGCTTTCAC
TGGGTGGCCG CCCAGCACGT CTTCGGTGTG CCCTACGACA CACCGGTGGC CGGCTACGGC
GTCGAAAACG TCAACACGCT GCGGCTGTGG GCGGCGCGCG CCTCGGAGCA GTTCGACCTG
GCCGTGTTCA ACGACGGCGA CTACCGCCGC GCGGTCGAGG AGAAGGCGCT GAGCGAGAGC
ATCTCCAAGG TGCTGTATCC CAAGGATCAC TCGCGCGAGG GCCGCGCGCT GCGGCTCAAG
CAGCAGTACT TCTTCGTGTG CTGTTCGCTG CAGGACATCA TGCGCCGCTA CAAGCGCCAG
CACAGCGGCT TCGACGCCTT CCCCGACAAG GTGTCGATCC AGATGAACGA CACGCACCCG
GCGATCACGG TGGCCGAGCT GATGCGCGTG TTCGTCGATG ACGAGCTGCT GCCCTGGGAC
AAGGCCTGGG ATCTGACCCG GCGCACGCTG GCGTACACCA ACCACACGCT CTTGCCCGAA
GCGCTCGAGC GCTGGCCCAT CGAGCTGTTC GAGGAGCTGC TGCCGCGCCA CCTGCAGATC
ATCTTCGAGA TCAACCACCG CTTCCTGCGC GAGGTGCACG TGTTCGCGCC CGGCGACGAC
GACCGCAAGC GGCGCATGTC GATCATCCAG GAGGACGGCG GCCGCAGCGT GCGCATGGCC
CACCTGGCGG TGGCCGGCTC GCACAAGATC AACGGCGTCG CCGCGCTGCA TACCGAGCTG
CTCAAGGCCA AAGTGCTGCG CGATTTCGCC GAGATGTGGC CGGAGCGCTT CGTCAACAAG
ACCAACGGCG TGACCCCGCG GCGCTGGCTG TGGCAGTGCA ACCCGGGGCT GTCCAAGGCC
ATCAGCGAGC GCATCGGCGA CGGCTGGGTG ACCCAGCTCG AGCAGCTCGA GCAGCTCGAC
AACTACGCCG ATGACGCCGA CTTCCACGCT GAGCTGAGCG CGATCAAACG CGACAACAAA
GAGCAGCTCG CGCGCATCAT CGAGCGCCGC AACGGCGTGC GGGTCTCGCC CGACTCGCTG
TTCGACGTGC AGGTCAAGCG CATCCACGAG TACAAGCGCC AGCTCCTCGA CTGCCTGCAC
GTGGTCGCCC TGTACCGGCG CATCAAGTTC GGCGGCGCGC GCGACACGGT CCCGCGCACG
GTGATCTTCG GCGGCAAGGC CGCGCCCGGC TACGAGCAGG CCAAGCGGCA CATCGCCCTG
ATCCACGACG TCGGCGCCAT CATCAACAAC GACCCCAGCA TCGGCGACCG CCTCAAGTGC
GTGTTCATCG CCAACTACAA CGTGTCGCTG GCCGAGCGCA TCATCCCGGC CGCCGACCTG
TCCGAGCAGA TCTCGCTGGC CGGCAAGGAG GCCTCGGGCA CCGGCAACAT GAAGTTCCAG
ATGAACGGCG CGCTCACCAT CGGCACGCTC GACGGCGCCA ACATCGAGAT CCGCGAGGAG
GTCGGCGCCG ATAACTTCTT CCTCTTCGGC ATGGACGCGG CCGAGGTCGA GGAGCGCCGC
CGCCAGGGCT ACCACCCGGG CGAGTACATC GCCGGCAGCC AGGAGCTGCG CGAGGCCATC
GAGCTCATCG AGTCGGGCTA CTTCACGCCC GGCGAGCCCG AGCGCCACCG CGCGGTCACC
GACAACCTGC GCCAGGTCGA TCCGTATCTC ATCTGCGCCG ACTTCGACGA CTACATGGCG
TGCCAGGACC GGGTGTCCGA GACCTACCTC GACCAGAGCC GCTGGCTGCG CATGGTGGTC
AAGAACATCG CCCACTCGGG CAAGTTCTCG AGCGACCGCA CCATCGCCGA GTACGCGCGC
GAGATCTGGA ATATCGAGCC GGTGCTGCTG CCATGA
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| Protein sequence | MKQDSSTPEP QVAVRVEDAR TGMSHEALKR AVLDHLLYTR AKTPRTASPL DIYFAVAHAV
RDRLTKRWLR TQRHYVELDP KRSFYLSAEF LLGRLLSHNL MNLGAYDYAV SELARYNVDL
AEILEQEPDP GLGNGGLGRL AACFLDSMAT QALPGMGYGI RYEFGIFRQE IEGGRQVEQP
DEWLRYGNPW EIARPDIAVK VRFGGYVQQS VQPDGSQRFH WVAAQHVFGV PYDTPVAGYG
VENVNTLRLW AARASEQFDL AVFNDGDYRR AVEEKALSES ISKVLYPKDH SREGRALRLK
QQYFFVCCSL QDIMRRYKRQ HSGFDAFPDK VSIQMNDTHP AITVAELMRV FVDDELLPWD
KAWDLTRRTL AYTNHTLLPE ALERWPIELF EELLPRHLQI IFEINHRFLR EVHVFAPGDD
DRKRRMSIIQ EDGGRSVRMA HLAVAGSHKI NGVAALHTEL LKAKVLRDFA EMWPERFVNK
TNGVTPRRWL WQCNPGLSKA ISERIGDGWV TQLEQLEQLD NYADDADFHA ELSAIKRDNK
EQLARIIERR NGVRVSPDSL FDVQVKRIHE YKRQLLDCLH VVALYRRIKF GGARDTVPRT
VIFGGKAAPG YEQAKRHIAL IHDVGAIINN DPSIGDRLKC VFIANYNVSL AERIIPAADL
SEQISLAGKE ASGTGNMKFQ MNGALTIGTL DGANIEIREE VGADNFFLFG MDAAEVEERR
RQGYHPGEYI AGSQELREAI ELIESGYFTP GEPERHRAVT DNLRQVDPYL ICADFDDYMA
CQDRVSETYL DQSRWLRMVV KNIAHSGKFS SDRTIAEYAR EIWNIEPVLL P
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