Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0223 |
Symbol | |
ID | 8542602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 326567 |
End bp | 328510 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646385019 |
Product | histidine kinase |
Protein accession | YP_003264757 |
Protein GI | 262193548 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGATT TCGAAGCGTC CCCGCCCGTG TTCGCAAGCT CCGGCCCCCG GAGCGTCCGC GCGAGCAGGC GTCGCCCGCT CATGGATGCG GACCAGAGCG GGGCCGAGGA GGCGTTCGAA CTCGCGGCGG AGGAGCCGCA GGGGCCTGGC CCGGTGCGCG TGTTGGTCGC CGACGACAGC GCCTCGATCC ACGAGGATTT CCGCAAGACC CTGCCGCCGC CGCGGCAGAG CGATCCTCTC GACGAGCTGG AGGCGGTCCT GTTTTCGTCG TCGTCGTCTG CTGCCGCGAC CTCGCACTCT GCGCCGCTGC CGAGCTTTGC CATCGACTCC GCCTTTCAGG GCGAAGAGGC GCTGGCCAAG GTCGAGGCCG CGCGCGCCCG CGGCGAGCCC TACGCGCTGG GCTTCATCGA CATCCGCATG CCGCCGGGCT GGGACGGCGT AGAGACGGCC CAGCGCATCC TGCGCGCCGA TCCGCACATT CAGCTCGTGT TGTGCTCGGC GTATTCGGAC TATGCCTGGG AGGACCTGGC GGAGGCCGTG GGCCACGGCG ATCGCGTCCT CATCCTCAAG AAGCCCTTTC GCACTATCGA GGTGCGTCAG ATCGCCAGCT CGCTGGCCGC CAAGTGGCAG CTCGTGCGCG AGCGCGAACG CCAGATGCAG GACCTCGAGG AGCGCGTGCA GGCGCGCACC GCCGAGCTGG CGCGCGCCAG CCAGGAGCTA CAGCGCGAGA TGCTCGAGCG CGGCAAGGTC GAGGCGGCCC TGCGCACGGC CCAGCGCCTC GAGGCGCTCG GGCGCATGGC GGCCGGCCTG GGCCACGAGA TCAACAACCC GCTCAACTTC GTCTCGGGCA GCCTCGAGAT GCTCGACGCC GAGCTGATGC GCGTGCGCGG ACGTCTGCGC GAAGACGAGT GGGCGCGCAT GGGCGAGATG CTGCACACGG CGGCCGCCGG CGTCGGCCGC ATCGCCCAGA TCGTGAGCGG CATCCAGTTC TTCGACCGAC CGACCGAGAT CCAGCTCGAG GTCGTCGATC TGTGGAAAGT GCTCACCTGG AGCGTCAAGA CCGTCGACGA TCGCCTCAGC CCCGATCTCG AGCTGGTGCT CGACCTCGAC GACGTTCCCG CCGTGCTCGG CAAGCGCATC GAGCTCGAGC AGGTCATCAA CCATCTGCTC GAGAACGCCA TCCAGGCCGT CGCCGCGGCG CCGGCGCCCG CGTCTGGCCG CGAACACAGC GTGCGCGTGG CCGCGCGCTG CGAGCACGCG CCAGGCGGGT CCGCGGGCGA GGTGGTCATC GAGATCGAGG ACACCGGCGA GGGCTTCCCG GAGGGCGAGA TCGACAAGGT CTTCGAGCCC TTCTACACCA CGCGCTCGCC CGACCAGGGC ACCGGCTTGG GGTTGGCGAT CTGCCGCACC ATCGTCACCG CGCTGGGCGG GAGCATCGCG GCCGAGAACC CGAGCGAAGG CGGCGCGCTG GTCACTGTGC GGCTGCCGGC GGCGTCTCCC GAGGCGATCC AGGCGGCCGC GGCCAAGCCC GCTGCGACAG CGCCCAAGCC GGTGCCGAAC GGGCGCGCGC GGGTGCTGGT CATCGACGAC GAGCCGCTGA TGTTGCGCAT CATGAGCCAC GCGCTGCGCG AGCACGAGGT GGTGACCGTG CAGAGCGCCG ACGACGCGCT GGAGCTTCTG CAGCGCGAGG ATTTCGACAT CGTGTTCTGC GACGTGATGA TGCCGCGCAT GAACGGGCCG CAGTTCTACG AGGCGCTGGC GCACCTGCAT CCGGGCCTGG AGCGGCGCAT CGTGTTCATC ACCGGCGGCG CGCGCGACCC CGAGGCGCAG CGCTTCCTCG ACGGCCTCGA CAACGACTGC TTGCAAAAGC CCATCCCGAC CGACCTGCTG CGCGCGCGCG TGGGCGAGAT GCTCGTGCGC CTGGCCCGCA TGTCCGAAAA ATAG
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Protein sequence | MSDFEASPPV FASSGPRSVR ASRRRPLMDA DQSGAEEAFE LAAEEPQGPG PVRVLVADDS ASIHEDFRKT LPPPRQSDPL DELEAVLFSS SSSAAATSHS APLPSFAIDS AFQGEEALAK VEAARARGEP YALGFIDIRM PPGWDGVETA QRILRADPHI QLVLCSAYSD YAWEDLAEAV GHGDRVLILK KPFRTIEVRQ IASSLAAKWQ LVRERERQMQ DLEERVQART AELARASQEL QREMLERGKV EAALRTAQRL EALGRMAAGL GHEINNPLNF VSGSLEMLDA ELMRVRGRLR EDEWARMGEM LHTAAAGVGR IAQIVSGIQF FDRPTEIQLE VVDLWKVLTW SVKTVDDRLS PDLELVLDLD DVPAVLGKRI ELEQVINHLL ENAIQAVAAA PAPASGREHS VRVAARCEHA PGGSAGEVVI EIEDTGEGFP EGEIDKVFEP FYTTRSPDQG TGLGLAICRT IVTALGGSIA AENPSEGGAL VTVRLPAASP EAIQAAAAKP AATAPKPVPN GRARVLVIDD EPLMLRIMSH ALREHEVVTV QSADDALELL QREDFDIVFC DVMMPRMNGP QFYEALAHLH PGLERRIVFI TGGARDPEAQ RFLDGLDNDC LQKPIPTDLL RARVGEMLVR LARMSEK
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