| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0219 |
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| Symbol | |
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| ID | 8542598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 321387 |
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| End bp | 322298 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646385015 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003264753 |
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| Protein GI | 262193544 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGT GGAAGACCCG CATAACCAAG GTCCAGTCCA TCCGGCCCCC CTCCGAAGTC
GGACAGGGCT GCTTGGTACT GATCTATCCC CCTGGGCCGG ATATGGGAAA GCGTTTCCCC
CTGGAACAGG AGGAGTTCGT GCTCGGCCGC GGCGCCGACT GCGATATCCA GGTCGATTAC
GACTCGGTGT CGCGGCGTCA CGCGCGCGTC TACCGCGACA GCCAGGGCCG CTGGCTGGTC
GAGGATCTGG GCTCGACCAA CGGCTCCTAC GTCAACGACA TGCCGGTGCA GCGTTCGCCG
CTGCAGGACT CGAACTTTCT CAAGATCGGC GCCGCCATCT TCAAGTTCCT GCTCGGCGCA
GGCATCGAGG CCTCGTACTA CGAGGAGATC TACCGGATGA CCATCATCGA TGGTCTTACC
GGGGTGCACA ACAAGCGCTA CTTCGTCGAG TTCCTCGAGC GTGAGATCGC CCGCTGTGCC
CGCCATCAGC GGCCGCTGAC GCTGCTGATG TTCGACATCG ACCACTTCAA GCAGATCAAC
GACACCCACG GGCACCTCAC CGGCGACTAC GTGCTCAAGG AGATGTCGCG CCGGCTGCGC
GAGCGAATAC GCAAAGAGGA GCTGCTGGCG CGCTACGGCG GCGAGGAGTT CGCCGCGGTG
CTGCCCGAGA CCGATCACGT GGGCGGTATG ACCTTTGGCG AGCAGATCCG TCAGCTCGTC
GGTGGCGAGC CCTTCGAGTA CGAGGGCGAC CGCTTCCAGG TGACCATCTC GGTGGGCGTG
CACACGCTCT ACGGCCAGAG CCTCGACGTC AAAGGCTTCA TCAAGCACGC GGACGACAAC
CTCTATCGGG CCAAGCGCTC GGGTCGCAAC CGCGTGATCG GCATGGACAA CGCCTCGGGC
GTGCACTCCT AG
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| Protein sequence | MSEWKTRITK VQSIRPPSEV GQGCLVLIYP PGPDMGKRFP LEQEEFVLGR GADCDIQVDY
DSVSRRHARV YRDSQGRWLV EDLGSTNGSY VNDMPVQRSP LQDSNFLKIG AAIFKFLLGA
GIEASYYEEI YRMTIIDGLT GVHNKRYFVE FLEREIARCA RHQRPLTLLM FDIDHFKQIN
DTHGHLTGDY VLKEMSRRLR ERIRKEELLA RYGGEEFAAV LPETDHVGGM TFGEQIRQLV
GGEPFEYEGD RFQVTISVGV HTLYGQSLDV KGFIKHADDN LYRAKRSGRN RVIGMDNASG
VHS
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