| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0213 |
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| Symbol | |
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| ID | 8542592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 314182 |
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| End bp | 315447 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646385009 |
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| Product | hypothetical protein |
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| Protein accession | YP_003264747 |
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| Protein GI | 262193538 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAC ACCTCTCCAT GCACCCGACC GCCGCACATC GCCGCACGCA CGACCAGCGA
GCGAACGAGC GCGGCCTCAC CATGGTCGAG CTGCTGATCA CCTTGGCCGT GGGCTCGATG
CTGCTCGGCT TCGTCTTCAA CATCCACGGA CGCATGTCGC GCGCGTATCG CTCGCAGACC
AGCGTGGGCG AGCTACAGCA GTCCACGCGC GCGGCCGCGG ACCTCATGGC GGCCCATGTG
CGCACGGCCG GTTTCATGAT GCCAAAGGGC GCCTACGTGA GCGCCGCCAT CGCAGCGCTT
GATGCCGGAC GAGCGCCCGA AAACCGGGGT ATTGTGGATA TAGACAGCGA CGGTGCCCCC
TTCGTGCCGG CGCTGGAGAT CGCCAACAAC CCGACGGGCA TGGTCCCGGG ACGCATGGAG
CCCGACCGGC TTCACACCTT CTCGGCCAAC TCTTTCGGAC AGACGACCGT CATCGCCGAC
CCGGGTCTCG ACACCATCAC GGTCGCCAAT GCCGGCTTCT TCAACGGCTA CACCGGGCTC
GCGCTCATCA CCAAAGGGCC GGTTCAAAAA CCGCACCCGC AACTCGGCAC GATGCCCGAT
ATCACCACCT ACAACGCCTG TATCGTACGG GTGACCGGTG CGGCTGCGAC CCAACTGTTC
TTCTTCGACG AGGGCCAGTT CAACAGCGGC GGCCTCGCGC ACTGCCGCCT CGGCCCCGAC
ACCGCCGGTG AACCGCGGCG CGCGCTTGAG CCAGGCTCTC AGGTCTTCCG CCTGGACGCG
CGCGCCTTTC GAGTCGACGT AGACCCTGGC GACGACGCGA AAACCCAACT CGCCGCGCTG
CAGATCTCGG CCACCGGCGG CCTGCTCGAC GACTGGCTCA CCGTGGGCGT CGGCTACGTC
GATCTGCAGC TCACGCAGCG CATCAGTGAA CCCTCCAACG GAGACGCTGA CGACCTGGAC
AACGACGGAG ACCTCCGCGC CGACTGGTAC GCGGCACCGT ACACGCTCGC CACGAATGAA
GCCATCACAC AGGTCGGCAT CTCGGTCGTC GTGCGCTCCG ACAGCAACGC GTCGGACACT
CAGACCCTCA TCGTCCCCAC GCCGCGCAAT GAGACCGGCG GTTTCACGGC GGCCAACAAC
CCCGAAGGCG ACGCCAGCGA CAAGAGCTTC TCGCCGACCG CGCCGCCTCC CGAATACGCC
GGGGAACACA TTTATCGCCA GAGTTCGCTC ATCGTAGACG TGCGCAACCT GGGCGCGTCA
TACTGA
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| Protein sequence | MSRHLSMHPT AAHRRTHDQR ANERGLTMVE LLITLAVGSM LLGFVFNIHG RMSRAYRSQT
SVGELQQSTR AAADLMAAHV RTAGFMMPKG AYVSAAIAAL DAGRAPENRG IVDIDSDGAP
FVPALEIANN PTGMVPGRME PDRLHTFSAN SFGQTTVIAD PGLDTITVAN AGFFNGYTGL
ALITKGPVQK PHPQLGTMPD ITTYNACIVR VTGAAATQLF FFDEGQFNSG GLAHCRLGPD
TAGEPRRALE PGSQVFRLDA RAFRVDVDPG DDAKTQLAAL QISATGGLLD DWLTVGVGYV
DLQLTQRISE PSNGDADDLD NDGDLRADWY AAPYTLATNE AITQVGISVV VRSDSNASDT
QTLIVPTPRN ETGGFTAANN PEGDASDKSF SPTAPPPEYA GEHIYRQSSL IVDVRNLGAS
Y
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