Gene Hoch_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0211 
Symbol 
ID8542590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp312810 
End bp313415 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID646385007 
Productpolysaccharide export protein 
Protein accessionYP_003264745 
Protein GI262193536 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGAA CGATCTACAT CCTCGCGGCG ATGCTCGTCC TCGCCTGTCA CGCGTGCGGC 
GGAGCGCCGC CGCCCACCTA CGATTACAGT CAGGAGCCGG ATCCTCGCCG GCTGCCGTAC
GTGCTCGGGG TCGGTGACTC GCTCGAGATC AACGTGTGGA AGAACCCGGA CCTGACCACC
AGCGTCACCG TCCGGCCCGA CGGCATCATC ACGATGCCGC TGATCGGAGA CCTGTACGCC
GCGGGTAAGA CCACCGAAGA GCTGAAGAAA GAGATCGAGG CGCAGCTCGC CAATTACATC
AAGCTCGAGG TCACCAAGAT CGCCATCAAG GTGACCAACG CGACCAGCAA CCGCTTCACG
GTGAGCGGCG AGGTCGCCAA GCCGAGCACC TTCCAGTCGC CCTACTACGT GACGGTGGCC
GAAGCCATCG CGCTGGCCGG CGGCTTCTCG CGCTTTGCCG ACCGCACCCG GATGCGCCTG
CTGCGCCGCG ATCACGAATC CGGCGAAGTG CGCACCATCC CCATCGATTA CACCCTCATC
GAGAGCGGCG AGCGCCCCGA CATGAACCTC GTGCTCATGC CCGGCGACGC GCTCTACGTA
CCCTGA
 
Protein sequence
MKRTIYILAA MLVLACHACG GAPPPTYDYS QEPDPRRLPY VLGVGDSLEI NVWKNPDLTT 
SVTVRPDGII TMPLIGDLYA AGKTTEELKK EIEAQLANYI KLEVTKIAIK VTNATSNRFT
VSGEVAKPST FQSPYYVTVA EAIALAGGFS RFADRTRMRL LRRDHESGEV RTIPIDYTLI
ESGERPDMNL VLMPGDALYV P