Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0210 |
Symbol | |
ID | 8542589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 311925 |
End bp | 312656 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646385006 |
Product | sugar transferase |
Protein accession | YP_003264744 |
Protein GI | 262193535 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTCT CTGTTCGCAT TGCCAAGCGC ACCATCGACA TCTGCGGCGC ACTTGCGGGC CTGGCGGTCA CCGCCCCGGT CATGCCCGTC ATCGCCGCAG CCATCTATCT CGACGACCGC GGGCCCATAT TCTACAAGCA GCGGCGTGCG GGAACGCTGC GCTCGGTGAG TGTAGAGAAT GGGATCAAGC GCCTGCAGTT CAACGAGTTC CACATGCATA AGTTCCGCAC CATGCGGACC GATGCGGAGA AGTTCACGGG CGCCGTGCTG GCGTCCAAGG GCGATCCTCG CATCACGCGT GTGGGCCGTT TTCTGCGCAA GTCGCGACTC GACGAATTGC CCCAGCTCTT CGAGGTGCTG CGCGGGACCA TGAGCCTGGT GGGGCCACGG CCCGAGCGCC CCGAGCTGCT CCAGGACCTG GCCTTCGCCA TTCCCTTCTT CGAGGAGCGC ATGCGCGACA TGAAGCCGGG CATCACCGGC TTGGCGCAGG TGTCGCTCGG GTACCAGGGC GACATCCCCG AGGGCAGCGA GATCGCGACC TTCGCCGGCG CGCTGCAAAA CCCCTTCGAC CTCGAAGAGG CGCAGGGCGC AGTCGCCGAC GACATGCGCA TCAAGCTGCT CTACGACCTG GCCTACGCGG CCGCGGCCGA GAAGCTCACC AGCTATCTCC CCATGGAGAT GAAGATTCTC TTCAAGACGC CCGTGATCAT GATCCGCGGC GCGGGTCGCT AA
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Protein sequence | MRLSVRIAKR TIDICGALAG LAVTAPVMPV IAAAIYLDDR GPIFYKQRRA GTLRSVSVEN GIKRLQFNEF HMHKFRTMRT DAEKFTGAVL ASKGDPRITR VGRFLRKSRL DELPQLFEVL RGTMSLVGPR PERPELLQDL AFAIPFFEER MRDMKPGITG LAQVSLGYQG DIPEGSEIAT FAGALQNPFD LEEAQGAVAD DMRIKLLYDL AYAAAAEKLT SYLPMEMKIL FKTPVIMIRG AGR
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