Gene Hoch_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0210 
Symbol 
ID8542589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp311925 
End bp312656 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID646385006 
Productsugar transferase 
Protein accessionYP_003264744 
Protein GI262193535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCT CTGTTCGCAT TGCCAAGCGC ACCATCGACA TCTGCGGCGC ACTTGCGGGC 
CTGGCGGTCA CCGCCCCGGT CATGCCCGTC ATCGCCGCAG CCATCTATCT CGACGACCGC
GGGCCCATAT TCTACAAGCA GCGGCGTGCG GGAACGCTGC GCTCGGTGAG TGTAGAGAAT
GGGATCAAGC GCCTGCAGTT CAACGAGTTC CACATGCATA AGTTCCGCAC CATGCGGACC
GATGCGGAGA AGTTCACGGG CGCCGTGCTG GCGTCCAAGG GCGATCCTCG CATCACGCGT
GTGGGCCGTT TTCTGCGCAA GTCGCGACTC GACGAATTGC CCCAGCTCTT CGAGGTGCTG
CGCGGGACCA TGAGCCTGGT GGGGCCACGG CCCGAGCGCC CCGAGCTGCT CCAGGACCTG
GCCTTCGCCA TTCCCTTCTT CGAGGAGCGC ATGCGCGACA TGAAGCCGGG CATCACCGGC
TTGGCGCAGG TGTCGCTCGG GTACCAGGGC GACATCCCCG AGGGCAGCGA GATCGCGACC
TTCGCCGGCG CGCTGCAAAA CCCCTTCGAC CTCGAAGAGG CGCAGGGCGC AGTCGCCGAC
GACATGCGCA TCAAGCTGCT CTACGACCTG GCCTACGCGG CCGCGGCCGA GAAGCTCACC
AGCTATCTCC CCATGGAGAT GAAGATTCTC TTCAAGACGC CCGTGATCAT GATCCGCGGC
GCGGGTCGCT AA
 
Protein sequence
MRLSVRIAKR TIDICGALAG LAVTAPVMPV IAAAIYLDDR GPIFYKQRRA GTLRSVSVEN 
GIKRLQFNEF HMHKFRTMRT DAEKFTGAVL ASKGDPRITR VGRFLRKSRL DELPQLFEVL
RGTMSLVGPR PERPELLQDL AFAIPFFEER MRDMKPGITG LAQVSLGYQG DIPEGSEIAT
FAGALQNPFD LEEAQGAVAD DMRIKLLYDL AYAAAAEKLT SYLPMEMKIL FKTPVIMIRG
AGR