| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0209 |
|---|
| Symbol | |
|---|
| ID | 8542588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 311309 |
|---|
| End bp | 311869 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646385005 |
|---|
| Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
|---|
| Protein accession | YP_003264743 |
|---|
| Protein GI | 262193534 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG CTCGTGTCAT TGCCTTGACC GTCCCCGGCT CGCTCGCGTT CCGCGACCTC
GCGATCCGGG TGATCATCGA GAGCTGTCGG CTCGTCGGCA GTCGGGCGGT CTTCTCCCGT
GTCGAGTCAA CGGCAGCCAA CGCGGCTTCA GCCCATGCAT CTGTCGATGA GGCTGATCGA
CATCTACAGG CCAACGATGG CTACGACCTC GGCGACTCGT TCACGGCCGA GTTCGTCTCG
GCGTTCTCCG AGATCTACAA CAACATCCCC ATCCACGCGT ACCAGGGCCG CGCCAACGGC
AGCATCGACC TGCGCGTGGA GATCACGCCC GACCGGGTCA TCGTGGAGCT CAAAGACATG
GGCGAGAGCT TCGATATCGA GGCAGTTCCG CTTCCCGAAG CCCTGCCCAC CGGCGGCATG
GGCATCCACA TCGCCCGCTC TATGCTGGAC GATCTCGTCT ACGAGCCCGG GCCGCCCAAT
CTGTGGCGAC TCACCAAATA CGCGAACGCG AGCCGCAAGG CAGCCGCGTC GGCGATGAGC
AGTCCCCCCT CCGGCGAATG A
|
|---|
| Protein sequence | MSEARVIALT VPGSLAFRDL AIRVIIESCR LVGSRAVFSR VESTAANAAS AHASVDEADR
HLQANDGYDL GDSFTAEFVS AFSEIYNNIP IHAYQGRANG SIDLRVEITP DRVIVELKDM
GESFDIEAVP LPEALPTGGM GIHIARSMLD DLVYEPGPPN LWRLTKYANA SRKAAASAMS
SPPSGE
|
|---|
| |