Gene Hoch_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0173 
Symbol 
ID8542552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp262694 
End bp263386 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content74% 
IMG OID646384969 
Producthypothetical protein 
Protein accessionYP_003264707 
Protein GI262193498 
COG category[S] Function unknown 
COG ID[COG4339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.773862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACT CTGAAGACGA CGGCGGCGCA GCCGGCGACG CGCTCGCGCC CGGCGACGCG 
CTCGCGCCGC CGCCCGGGCC GCCGCTGCCG CCCGGACTGT GGGAGGCGCT GCGGCGCTGT
TACGAGACGC CGCCGCGCTT CTATCACGAC GCCGCGCACG TGAGCGAGGT CGCCCGCCAG
TACTGCGCCG TGGAACGCGA GCTGGGCTGG GCGCAGCCGC GCGAGGTGTA CTGGGCGGTG
TTGTTTCACG ACGCGGTGTA CGAAGTCGGC GCGCGCGACA ACGAGGCCCG CAGCGCGGCG
CTGGCCGTGG AATGGGCCGC GCGCTGGCTG GTCGGCGAGC ATGCCTTCTG CGCGCCCGGC
TTTCGCGCGC AGGAGGCGAG CCGGCTCATC GAGCTAACGG CCCGCCACGG CGCGCTCACG
GCCGCCGATG TCGATGACCA GAGCGCGCGC TTCCTCGACT GCGACATGGC CATCCTGGGC
GCGCCGCCCG AGCAGTACGC GATCTACGAG CGCGACGTCG CCCGCGAGTA TCTGCCGCAC
TACGGCGAGG CCGACTACCA GCGCGGGCGC GCCGCGTTCC TGGCCGGCAT GCTGGCGCGG
CCGCGCATCT TCTTGTCCGA CTACTTCCAC GAGCGACTCG ACGCCCAGGC GCGCGACAAT
CTGCGCAGCG CGCTGGCGGG GCTGGGCGAC TGA
 
Protein sequence
MSNSEDDGGA AGDALAPGDA LAPPPGPPLP PGLWEALRRC YETPPRFYHD AAHVSEVARQ 
YCAVERELGW AQPREVYWAV LFHDAVYEVG ARDNEARSAA LAVEWAARWL VGEHAFCAPG
FRAQEASRLI ELTARHGALT AADVDDQSAR FLDCDMAILG APPEQYAIYE RDVAREYLPH
YGEADYQRGR AAFLAGMLAR PRIFLSDYFH ERLDAQARDN LRSALAGLGD