Gene Hoch_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0171 
Symbol 
ID8542550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp259301 
End bp260440 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content72% 
IMG OID646384967 
Producthypothetical protein 
Protein accessionYP_003264705 
Protein GI262193496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.8382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGT TGGATCCCAG TGTTCTCGAC GGACCCCTGC GGGCGGTGTC GCCCGGGGTC 
ATCGATCTCG CGGTCGAGGA CAGCAGCGTC CACCGGGTGT CGCAGCTCGC CCACCGCGGC
GAGGTCATCG AGGCCGCGCA GCAGGCCGAG GCGCTGCTCG CCGACCGCGT CTACGACATG
CGGCTCATCG GCTACTTCCT GTTCGGCGTG TTCCTCGAGC GCGGCCTGGC GTATCTGCCC
GACCTGCTGT ACCGCATCCG CGACCTGTTG ATGGACGACT TCGCCGCGCT CGGGCCCAAC
CGGCGCAAGC CGCGCGTGGT CGACGCCGTG CTGCTGTGGC TGTTCCAGAG CATCGACGCG
CGCGCCCGCT TCCACGCCGA TTTTCAGGAC GAGACCTGGC AGGCGTGGCT CGACGACAGC
GGCAGCGGCC TGAGCAAGCG CATCGTGGCC AGCGTCGCCG AGGTCCAGCA GGCGGCCACC
ACGCGCCTCG ACGAGCCCCA GTGCGCGCCC GCGCTGCTGC GCCTGCGGCT GTGGATCGAG
AACGACTTCG CCCGCGCCCT GGTGCGCCAG CATCAGCCCG CGGCCTCGGT CACGACGCGA
CCGCTCGAGC GCGCGCGCGC AAGCGAGCGC CCGGTCGCGC GCGCCCCCGA GCGTCTGCGG
CAGAGCGAGC GGCCGCGGCA GAGCGAGCGT GCGCACGCCG GCGAGCGGCC GCGCGAGTTC
GACCGCTCGG GCGAGCCCTC GGTGCCGCTG TCGGCGACGG AGGAGGCCGC GCCCGCGCGC
CCGGCGCGCA CCACCCTGGT CGGCACGGCG CCCGGCCCCA TGCCGGCCAA CCCGCTGCCG
GCCGAGGTCG GCGAGGTCTC GCCGGCCATG CAGGAGCTTC TGCGCAAGCT GCGCGGCTTC
TCCAACCTGG TGCAGCGCGG CGACTACGCC AAGGCCGCCG TCATCGCCAA CGACCTGCGC
CAGATCATCG AGAACTTCGA CCCCGTGGTG TTCCTGCCGC GGCTGTTCGT CGATTACTTC
CGCAACCTCA ACGGCTCCAT CGCCGAGATC CTGCCGCACT GGGAGGCCAT GGGCAGCCCG
TCGTGGAAGG CGCTCGAGCA GTTCTACCGC GTCGATCTCG AGTCCTTTCT CGACGAGTAG
 
Protein sequence
MPSLDPSVLD GPLRAVSPGV IDLAVEDSSV HRVSQLAHRG EVIEAAQQAE ALLADRVYDM 
RLIGYFLFGV FLERGLAYLP DLLYRIRDLL MDDFAALGPN RRKPRVVDAV LLWLFQSIDA
RARFHADFQD ETWQAWLDDS GSGLSKRIVA SVAEVQQAAT TRLDEPQCAP ALLRLRLWIE
NDFARALVRQ HQPAASVTTR PLERARASER PVARAPERLR QSERPRQSER AHAGERPREF
DRSGEPSVPL SATEEAAPAR PARTTLVGTA PGPMPANPLP AEVGEVSPAM QELLRKLRGF
SNLVQRGDYA KAAVIANDLR QIIENFDPVV FLPRLFVDYF RNLNGSIAEI LPHWEAMGSP
SWKALEQFYR VDLESFLDE