| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0167 |
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| Symbol | |
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| ID | 8542546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 247628 |
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| End bp | 251113 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646384963 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003264701 |
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| Protein GI | 262193492 |
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| COG category | [L] Replication, recombination and repair
[S] Function unknown |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGC CCACGGCCAA GACGAGCTTC TTCGCGGACC TCCACACTCA CTCCAAGTAT
GCAAGAGCAA CCAGTAAGCT GAGTGATCTA GAGCATTTGG CTTACTGGGG AGCGAAGAAA
GGAATCTCGG TCGTGGGCAC TGGTGATTTC ACGCACCCGG CCTGGCGGGG CGAGCTGCGC
GACAAGCTGG TGCCGGCCGA GCCGGGGCTG TTCCGGCTGC GCGAGGACAT CGAGCGCGAG
GTGCGCGCGC GCCTGGACGT GCCGGTGCGC GGCCTGCCGC GCTTCCTGCT CTCGGTCGAG
ATCTCGACCA TCTATAAGAA GGGCGACAAG ACCCGCAAGG TCCACCATCT GATCTACGCG
CCCGACTTCG ACAGCGTCGA CCGCATGGTC GAGAGCCTGG CCAAGATCGG CAACCTGCGC
GCCGACGGCC GGCCCATCCT CGGCCTCGAC TCGCGCCATC TGCTCGAGAT CGCGCTGTCC
GCGGGCGAGG GCTGCTACCT GGTGCCGGCG CACGTGTGGA CGCCGTGGTT CGCCGTGCTC
GGCTCCAAGT CGGGCTTCGA CGCGGTCGCC GACTGCTACG GCGACCTGGC CGAGCACATC
TTCGCCGTCG AGACCGGGCT GTCCTCCGAC CCGCCCATGA ACTGGTGCCT GTCGTCGCTC
GACCGCTACA CCCTGGTGTC CAATTCGGAC GCGCACTCGC CGCCCAAGCT CGGCCGCGAG
GCCAACGTGT TCACCTGCGA CATGGACTAC TTCGCCATGC GTCGCGCGCT CGAGACCCGC
GAGGGCTTCG CGGGCACGGT CGAGTTTTTT CCCGAGGAGG GCAAATACCA CCTCGACGGG
CACCGCAAGT GCGAGGTCGT GCTCGACCCG GCCGAGACCA AGGCCCTCGA GGGCCGCTGC
CCGAGCTGCG GCAAGCCGCT AACCGTGGGC GTGATGCATC GGGTGCAGGA CCTGGCCGAC
CGACCGCTGG GCTATCGCCC CGCCGACGCG CCCGATTTCC GCAGCTTCGT CCCGTTGTCC
GAAATCGTCG CCGAGATCGT GGGCGCCGGG GTCAACACCA AGGCCGTGGG ACGCGCGTAC
GAGAGCCTGC TGGCGCGACT GGGCTCGGAG CTGTTCATCC TCGAGCACGC GCCGATCGAG
GATCTGCGGC GCGGCGGCCA CGGGCAGCTC GGCAGCCGTC TGGCCGAGGC CGTGACCCGC
ATGCGCGAGG GCCGCGTGAT CCGGCAGGCG GGCTACGACG GCGAGTACGG CGTGATCCGG
CTGTTCGAGG CGCGCGAGCT GCGCCGCCCG GCGGCCGTGA GCCTGGCCCT GGCGCTGCCC
GAGCCGCCCG CGGCTGAGGC TTCCGCTCCG GCTCCGGAGC CGGTCCCGGC GTCGCCCGCG
TCCGTGGCTT CCGCGCCCGG TACCGCTGCG GAGTTTGATC CACCCCCGTC CGAAATCCCG
CGGCCCTCGC CCGAAACCCT GCGCGACGGC GCGGCGAGTT CGCTGCTGTC TGCGCTCGAT
CCCGAGCAGC GCCGGGCGGC CGAGTGCGTG CACGGTCCGC TGCTGATCGT CGCCGGGCCA
GGCACGGGCA AGACCCGCAC GCTCACGCAT CGCATCGCCC ACCTGGTCGA AGACATCGGC
GTCGAGCCCG CCGCGTGCCT GGCCATCACT TTCACCAATC GCGCCGCCGG TGAGCTGCGC
GAGCGCCTCG ACGCGCTGTT GCCGGGCGCG GGCGCGGGCG TCGCCGTGCA CACCTTCCAC
AGCCTGGCGC TGCGCATCCT GCGCGAGAAC CGCGTGCGCG CCGGTCTGCA TCGCGGTTTT
CGCGTCGCCG CCGAGAGCGA GTGTGTGGCG CTCCTGGCCG ATGCCCTGGG CTGTTTGCCG
GCCAAGGCGC GCAGCGTGCT CGCCCGGCTG CGGCGCGCGA GCGTGGCTGC GAGTGTCGCG
GCGGGCGCGG GCCAGGGGGC GGCCGAGCAG CCGCCGGAGG CGAGCGCAGA GTCACTCGAT
GACGAGCTGG CGCGCGCGCA CCGCGTCTAC CGCCAGGCGC TGGAGGAGGC CGCGCGTCTC
GACTTCGACG AGCTGCTGGG CCGCGCCGAA GCGCTGCTGC GCGAGGACGA CATCGGCCTG
GCCTACCGCG CGCGTTTTCG CCACCTGTCC ATCGACGAGT ATCAGGACAT CGACGCCCAG
CAGTATCGGC TCATCGCTTT GCTCAGCGGC GACGTCGGCG CGGCCGGCAT GCGCGACGGT
GGCCAGGACG AGGCTGGCGG CTCGCGCAGC CTGTGCGCGA TCGGCGACCC CGACCAGGCC
ATCTACGGCT TCCGCGGCGC CGACGTCGGC TTCTTCCTGC GCTTCCGCGA GGAGTATCCG
CGCACCCGCG AGGTCCAGCT CACGCGCAAC TACCGCTCTA CGGCGACCAT CGTCGACGCG
GCGCTGCAGG CCATCGCGCC GCACTCGCTG GTCGCCGAGC GCGTGCTCGA GGCCGCCGAT
GCCGGCGAGG GCGCGGCTTC GCTGCCCGTG CACGTGGTGT CCGCGGCCAG CGCGCGCGCC
GAGGCCGAGA CCGTCGTGCA CAGCATCGAG GCCCTGATCG GCGGCACCAG CTTCTTCTCG
ATGGATAGCG GACGCCTGGA CGACATCGGC GTCGGCGTCG GCGTCGGCGC GGCGCCCGGC
GAGCGAGGCG CCGCGCCGAC CGAGAACGAC GAGAGCGACG ACCTGTCGTT TTCGGACTTC
GCCGTCCTGT ACCGCACCGA CGCCCAGAGC GGGCTGCTGT GCGAGGCGCT GGCGCGCTCG
GGCATTCCCT TTCAGAAGCG CTCGCACCAC CGCCTGGGCG ACGATCCCTT GACCGTGGCC
CTGCTCGGCG AGATGCGCGA CGCGACGGCC GCGGCCGCGG CCGAGGACGC AGAGTCGCCA
CCGCCGGGCG CGCTGCAGGC GTTTCTCGAC GCGGCCTCGA TCCGCCTGCG CGCGCGTCTG
GAGACGGCCG TGGCAGCCGG CCCAACGCCC GACGCGACCG CAGCCGAGGC GACAACCTCT
GCGGTGACAG GCGATCCGGC GCTCGACCCG GCGCGCATCG CGGCCGTGGC CGATCTGCTC
CGGCCGCTGG CCGCGCGCTG CGACGATCTC GATAGCTTTG CCAACGAGCT GGCGCTGGAA
GCCGAGGTCG ATCTCTGGGA TGCGCGCGCC GATCGCGTCT CGCTGCTGAC CCTGCACGCG
GCCAAGGGTC TGGAGTTTCG CGTGGTGTTC CTGGTCGGCT GCGAGGACGG CGTGTTGCCG
CTGCGCTGGG GCAGCGGCCG GGCCGAGGAC CTCGGCGAGG AGCGGCGGCT GTTCTTCGTC
GGCATGACCC GCGCGCGCCA GCGTCTGTAC CTGCTGCACG CGCGCAAGCG GCGCTGGCGC
GGCGAGCTGT GCGAGCTGCC GGTGTCGCCC TTCGTGCGCG ACATCGAGGA TCAGCTCTTG
GCCCGGGGCT CGTCGCGGCC GCGCAAGAAG CCGGTGGTGC TGCACGAGCA GCTCGGCCTG
TTCTAA
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| Protein sequence | MDVPTAKTSF FADLHTHSKY ARATSKLSDL EHLAYWGAKK GISVVGTGDF THPAWRGELR
DKLVPAEPGL FRLREDIERE VRARLDVPVR GLPRFLLSVE ISTIYKKGDK TRKVHHLIYA
PDFDSVDRMV ESLAKIGNLR ADGRPILGLD SRHLLEIALS AGEGCYLVPA HVWTPWFAVL
GSKSGFDAVA DCYGDLAEHI FAVETGLSSD PPMNWCLSSL DRYTLVSNSD AHSPPKLGRE
ANVFTCDMDY FAMRRALETR EGFAGTVEFF PEEGKYHLDG HRKCEVVLDP AETKALEGRC
PSCGKPLTVG VMHRVQDLAD RPLGYRPADA PDFRSFVPLS EIVAEIVGAG VNTKAVGRAY
ESLLARLGSE LFILEHAPIE DLRRGGHGQL GSRLAEAVTR MREGRVIRQA GYDGEYGVIR
LFEARELRRP AAVSLALALP EPPAAEASAP APEPVPASPA SVASAPGTAA EFDPPPSEIP
RPSPETLRDG AASSLLSALD PEQRRAAECV HGPLLIVAGP GTGKTRTLTH RIAHLVEDIG
VEPAACLAIT FTNRAAGELR ERLDALLPGA GAGVAVHTFH SLALRILREN RVRAGLHRGF
RVAAESECVA LLADALGCLP AKARSVLARL RRASVAASVA AGAGQGAAEQ PPEASAESLD
DELARAHRVY RQALEEAARL DFDELLGRAE ALLREDDIGL AYRARFRHLS IDEYQDIDAQ
QYRLIALLSG DVGAAGMRDG GQDEAGGSRS LCAIGDPDQA IYGFRGADVG FFLRFREEYP
RTREVQLTRN YRSTATIVDA ALQAIAPHSL VAERVLEAAD AGEGAASLPV HVVSAASARA
EAETVVHSIE ALIGGTSFFS MDSGRLDDIG VGVGVGAAPG ERGAAPTEND ESDDLSFSDF
AVLYRTDAQS GLLCEALARS GIPFQKRSHH RLGDDPLTVA LLGEMRDATA AAAAEDAESP
PPGALQAFLD AASIRLRARL ETAVAAGPTP DATAAEATTS AVTGDPALDP ARIAAVADLL
RPLAARCDDL DSFANELALE AEVDLWDARA DRVSLLTLHA AKGLEFRVVF LVGCEDGVLP
LRWGSGRAED LGEERRLFFV GMTRARQRLY LLHARKRRWR GELCELPVSP FVRDIEDQLL
ARGSSRPRKK PVVLHEQLGL F
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