| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0164 |
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| Symbol | |
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| ID | 8542543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 241781 |
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| End bp | 244672 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646384960 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003264698 |
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| Protein GI | 262193489 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGAA GAAGGTCCGC GGCGCCCCAG CGGGGACGAC GCATCGCCGC CGCTGCCGTG
TTCGCCGCCG CCCTGGCGCT GCTTGCGCAA CCGGCGGCAG CCGATCTCGC CAGCGGCAAG
CGCAAGCTGC TGCGTGGCGA CTACGCGGCC GCCCGCGCCG ATCTCGCCGA TGTCGGCGGC
CGCGATCGCG CCGCCGCGCA GCTCGCGCTG GCCCGCGTGG AACAGCGCGT GGGCGCCTAC
GACGCGGCCG AGAAACGCGC CCGCGGCCTG CTCGGCCGGG GCGACGCGAT CGCCACCGAC
GCGCGCGTGT TCATCGCCGA GTTGCAGCGC CTCACCGGCC GCTACGCCGA CGCCCGGCGC
GAGCTCGAGG CCGTGGTCTT CCCCGGCGGC GCGCCCGCGG CCCCGGCGGC GGGTAACGCG
GCAGCGGGCG GAGCGCTGGC GGGCAAGACG CCGAGCGCGC ACCTGCGCGG CCGCTACCTG
CTCGGCCTGG TGTACGCCGA TCTGGGCCAG CAGCAGCTCT CCGACGCGCT CTTCGAGACC
TTCTTCGACG ACTGGAACAG CGGCCGCATC GACGCCAAAG ACGCGCCCGG GCTGCTGTAC
CTGGCCCAGG CGGCGCGCTA CCGCGAGTCG TTCCAGGAGG CCAACGACGT GTTCCGCGAG
GCCGTGGGCA TCGACCCGCA ACTGCTCGAG GCCAACCTCG CCTGGGGCGA CATGGGCCTG
GAGAAGTACG CGGTGGCGCT GGCCGAGCAG AGCTACGACG AGGTGCTCAA GATCGACCCC
AATCACCCCG ACGCGCACAG CGGCATGGCG CGGGTCAAGC TCGAGCAGAG CTACGACCTG
GCCGCGGCCT TCGACCACCT CGAGAAGGCG CTGGCCTCCA ACCCCCGGCA CCTGCGCTCG
CTGCTGGTGC GCGCCAGCCT GGAGATCGAT CAGAACCAGT GGGACGCGGC GCAGGCCACG
CTGGCCGAGG TGTTCGCGGT CAACCCCATG AACTTCGAGG GCCGCGCGCT GCTGGCCACC
GTGCACTGGC TGCGCGACGA CAGCGCCGCC TACGAGGCCG AGCGCGAGCG CGTGCTGGCG
GCTAATCCCG GCTACGCGGC CTTCTATCAC ATCGTCGCGC GCAGCGCGGT GCGCGAGCAT
CGCTACCGCG AGGCCATCGC GCTCGAGGAG CAGGCGGTCG AGCTCGACCC CGACTACCAC
GAGGCCATGC AGGCGCTGGG CACCGGCTAT CTGCGCCTGG GCGACGAGGA GCGCGGCCTG
CGCTGGATGC GCAAGTCATG GCAGGGCGAT GAGTACAACG TCCGCACCTA CAACACGCTC
GAGCTGTTCG AGAACGAGCT GCCCAAGGAG TACGGCTTCG TCCAGAGCAA GTACTTCAAG
TACCGCTATC CCAACGAGGA GCGCACCATG CTGCGGCGCT ACGTCGAGCC GCTGCTCGAG
CGCGCCTTCG AGGACATGGT CGCGCGCTAC GGCTTCCGCC CCGAGGCGCC CCTGATCATC
GAGCTGTTCC ACAACCCCGA GCACTACAGC GTGCGCACCG TGGGCCTGCC CAACCTCGGC
GCCCTGGGCG TGTGCTTCGG CCACGTGATC ACGGCGATGT CGCCGGCCGT GGGCGAGATC
AACTGGGGCA TGGTGCTGTG GCACGAGCTG GCGCACGTGT TCGCCATCCA GATGTCCAAC
TCGCGCGTGC CGCGCTGGTA CACCGAGGGC CTGAGCGAGT ACGAGACCCT GCGCGCGCGG
CCCGAGTGGC GGCGCGAGAA CGACGCCGAT CTGTACGCGG CGCTGGCCGA TGGCACGCTG
CCCTCGGTGG CCGAGCTCAA CTACAGCTTC ATGCGTCCGA GCATGCAGCA GGTGATGGTC
GCCTACTATC AGTCGGCCGT GACCATGGAG TACATCGTCG AGACCCACGG CTTCGACAAG
GTGCTCGAGG GCCTGCGCCT GTTCGGCCAG GGCAAGGAGA CGCCCGAGGT CATCGAGCTC
ATCACCGGCC ACAGCGTGGC CGACTTCGAC ACCGCCTTCC GCGCGTACCT GCGCCATCGC
CTGGCGCCCT ACCGCGGCAG CTTTCGCGTG CCCACCGAGG GCTTTGACGA CCTCGACGCG
CTGCGCGCGG CCGCCCGCGC CGCCGAGGAT GACGCCGACG CGCAGGCCGC GCTGGCGCTC
GGCCACTTCT ATCAGGGCGA CGCGCCGGGA GCGTTGCAGG CCGCCGGGCG CGCGCTCGAG
CTGATGCCGG CGCATCACCT GGCGCTGTAC GTGAGCGCCG AGGTGGCGCT GCGCCAGCGC
GATGTCGACA CCGCGCTCGA ACACTTCCGC GCGCTGATCC GGGCCGGCGG CGACAGCTTC
GACGTGCGCG GCCGCCTGGG CATGATCGCG CGCCTGCAAG ACGACCTCGA CGAGGCCATC
CGGCAACTGT GCGCGGCCAA GCGCCTCGAC CCCGAGCGCT CGTATCCCTA CTCCGAGCTG
TACGATGTCT ACAAGGAAGC CGGACGCATG GACGAAGCGC TGGCCGAGCT AGAGACCTAC
GTGATGCTCG AGCAGATGCA GTACGGGCCG CTGCGCGAGC TGGTCGGCGC CTACGCCGAG
CGCGCGCGCT GGGACAAGGT GCGCGTCTAC GGCGAGATGG CCGTGCACAT CAACCCGTCC
GATGCCGAGC TGTTCCTGAT GCTGGGCCAG GCCTATCTCG AGACCGGCGA TCCCGCGCAG
GCGCTGTTCA CATTCGACAG CGCGCTGCTG GCCAAGCCCG CGCTGCGCCG GCCGGCCCTG
GCCCACATCG GCAAGGCGCG CGCGCATCTG GCGCGCCGTC AACGCCGCCC GGCCGCGGCC
GAGCTGCGCA GCGCGCTGCA GCTCGAGCCC GAGAACGCCG AGGCCCTCGA GCTGCGCCGC
ACGATGCGCT GA
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| Protein sequence | MMGRRSAAPQ RGRRIAAAAV FAAALALLAQ PAAADLASGK RKLLRGDYAA ARADLADVGG
RDRAAAQLAL ARVEQRVGAY DAAEKRARGL LGRGDAIATD ARVFIAELQR LTGRYADARR
ELEAVVFPGG APAAPAAGNA AAGGALAGKT PSAHLRGRYL LGLVYADLGQ QQLSDALFET
FFDDWNSGRI DAKDAPGLLY LAQAARYRES FQEANDVFRE AVGIDPQLLE ANLAWGDMGL
EKYAVALAEQ SYDEVLKIDP NHPDAHSGMA RVKLEQSYDL AAAFDHLEKA LASNPRHLRS
LLVRASLEID QNQWDAAQAT LAEVFAVNPM NFEGRALLAT VHWLRDDSAA YEAERERVLA
ANPGYAAFYH IVARSAVREH RYREAIALEE QAVELDPDYH EAMQALGTGY LRLGDEERGL
RWMRKSWQGD EYNVRTYNTL ELFENELPKE YGFVQSKYFK YRYPNEERTM LRRYVEPLLE
RAFEDMVARY GFRPEAPLII ELFHNPEHYS VRTVGLPNLG ALGVCFGHVI TAMSPAVGEI
NWGMVLWHEL AHVFAIQMSN SRVPRWYTEG LSEYETLRAR PEWRRENDAD LYAALADGTL
PSVAELNYSF MRPSMQQVMV AYYQSAVTME YIVETHGFDK VLEGLRLFGQ GKETPEVIEL
ITGHSVADFD TAFRAYLRHR LAPYRGSFRV PTEGFDDLDA LRAAARAAED DADAQAALAL
GHFYQGDAPG ALQAAGRALE LMPAHHLALY VSAEVALRQR DVDTALEHFR ALIRAGGDSF
DVRGRLGMIA RLQDDLDEAI RQLCAAKRLD PERSYPYSEL YDVYKEAGRM DEALAELETY
VMLEQMQYGP LRELVGAYAE RARWDKVRVY GEMAVHINPS DAELFLMLGQ AYLETGDPAQ
ALFTFDSALL AKPALRRPAL AHIGKARAHL ARRQRRPAAA ELRSALQLEP ENAEALELRR
TMR
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