Gene Hoch_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0163 
Symbol 
ID8542542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp240791 
End bp241747 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content68% 
IMG OID646384959 
Productdienelactone hydrolase 
Protein accessionYP_003264697 
Protein GI262193488 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT CGGTATCGAA ATCCCCCCGT CATGGCGTCC GCGCGTTGCG CGCGCGCATC 
CTCGGCGTCG CTGGCGCCGC TCTGCTGCTT GCGGCCTGCG GCGGCAAGGG CGGCGAGGGC
GCGGAAGAGC CCGCCATGGA TCCCAACGCC GAGATGGTCG GCAAAGACAT GGGCGCCATG
GACGAGAGCG GCAAGCCCAT GGCCGCCATC GACGACATCG ACATGGACGG CATCGTCGGT
GAGGAGGTCG CCTACGAGGC CGACGGCATC ACCATGCAGG GCTACCTGGC CTACGACGAG
AACGCCGACG GCAAGCGCCC GGGCGTGCTC GTGGTCCACG AGTGGTGGGG CCACAACGAC
TACGCCCGCC AGCGCGCGCG CATGCTGGCC AAGCTGGGCT ACATCGCGTT CGCCGTGGAC
ATGTACGGCG AGGGCAAGAA CACCGAGCAT CCCCAGGAGG CCGGCGCCTT CGCCATGGCC
GCCAAGAGCA ACCTCGAGGG CGCGCGCGTG CGCTTCGAGA AGGCGCTCGA GGTGCTGGCG
AGCAACGAGC ACACCGACGT CGAGGACATG GCCGCGATCG GCTACTGCTT CGGCGGCGGC
GTGGTGCTGG AGATGGCGCG CATGGGCGTC GAGCTCGACG GCGTGGTCAG CTTCCACGGC
AGCCTCGACA CCGACAACCC GGCGCAGCCC GGCCAGGTCA AGGCCTCGGT GCTGGTGCTC
AACGGCGACA ACGATCCCTA CGTCAAGCCC GAGGTGGTGA GCGCGTTCAA AGAGGAGATG
GACGCGGCCG ACGTCGATTA CCAGTTCGTC GGCTACGACG CCGTGCACAG CTTCACCAGC
CCCGACGCCG ACCGCTACGG CGAAGAGCAC GGCCTGCCGC TGGCCTACGA CGAGGAAGTC
GACCGCGCGT CCTGGAAAGC GATGCAGGAC TTCTTCAACC AGATCTTCGC CGACTGA
 
Protein sequence
MNQSVSKSPR HGVRALRARI LGVAGAALLL AACGGKGGEG AEEPAMDPNA EMVGKDMGAM 
DESGKPMAAI DDIDMDGIVG EEVAYEADGI TMQGYLAYDE NADGKRPGVL VVHEWWGHND
YARQRARMLA KLGYIAFAVD MYGEGKNTEH PQEAGAFAMA AKSNLEGARV RFEKALEVLA
SNEHTDVEDM AAIGYCFGGG VVLEMARMGV ELDGVVSFHG SLDTDNPAQP GQVKASVLVL
NGDNDPYVKP EVVSAFKEEM DAADVDYQFV GYDAVHSFTS PDADRYGEEH GLPLAYDEEV
DRASWKAMQD FFNQIFAD