Gene Hoch_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0158 
Symbol 
ID8542537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp234644 
End bp235423 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID646384954 
Producthypothetical protein 
Protein accessionYP_003264692 
Protein GI262193483 
COG category[S] Function unknown 
COG ID[COG5522] Predicted integral membrane protein 
TIGRFAM ID[TIGR02206] conserved hypothetical integral membrane protein TIGR02206 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCA AAGAGATCAC GGAACCCTTC GATTTGTTCG GGCCGGCTCA TCTCATCGCG 
ATGCTGCTCG TCGCCGTGGT GTGTATCGGA TTTCCGCTGT GGATGCGCGG CCGCCCGCCG
CGCTGGCAGC AGCGCGTGGC CTACGGCATC GCCGCGCTGA TGCTGCTCTA CCGGATGTGC
GCGCCCTTCA TCTACAACTA CTACGACGAC CTGCCGTTGA TCTGGAATCT GCCCCTGCAG
ATCTGCGGCA TGCTGGCGGT GCTCAACGCC TACATGCTGA TCACGCGCAG CTACCGGGTC
TATCACGTGG CCTATTTCCT GACCCTGGCC GGCGCCATGC AGGCGCTGAT CACGCCGGAT
TCCTTCCGCG CCTTCCCCCA CGTCACCTAT CTGCTGTCGG TGCTCACCCA CGGCCTCATC
GTCCTGGCCG TGAGCTACGC GACCCTGGTG TTCCGCTTCC GGCCGACCTG GCGTTCGGTC
GCGATCGTGT TCGTGTTTGG CAATCTGTAC ATGCTGGCGC TGTTTCCCAT CAACAAGCTG
CTGGGCACCA ATTTCATGTA CGTCATGCAC AAGCCGCCCT CGGCCTCGGT GCTCGACTAT
TTTGGGCCGT GGCCGTGGTA TCTGATCGTG GCCGAGCTCA TCGGCGTGGT GCTGTTCCTG
TTCTGGTATG CGCCCTTTGC CATCAAGGAT TGGGTCAAAG GCCGCAAACC CACCTACGAG
CAGATCTCGG GCCAGGCCTA CGAGAAGGCG CTGGCCGCCG ACCGCGCCGC CCATTCCTGA
 
Protein sequence
MFAKEITEPF DLFGPAHLIA MLLVAVVCIG FPLWMRGRPP RWQQRVAYGI AALMLLYRMC 
APFIYNYYDD LPLIWNLPLQ ICGMLAVLNA YMLITRSYRV YHVAYFLTLA GAMQALITPD
SFRAFPHVTY LLSVLTHGLI VLAVSYATLV FRFRPTWRSV AIVFVFGNLY MLALFPINKL
LGTNFMYVMH KPPSASVLDY FGPWPWYLIV AELIGVVLFL FWYAPFAIKD WVKGRKPTYE
QISGQAYEKA LAADRAAHS