Gene Hoch_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0147 
Symbol 
ID8542526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp216531 
End bp217211 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content73% 
IMG OID646384943 
ProductDNA repair protein RadC 
Protein accessionYP_003264681 
Protein GI262193472 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCC TCAACCTCTA CGACATTGCC GATCTGCCGC GCGAGCGGTT CCTGGCCTAC 
GGCGGCGAGC GCGTGAGCAA CGCCGAGTTG CTGGCCCTCA TCCTCGGCAC CGGCACACGC
GGGCGCAACG TCCTCGAGCT GGCCGAGCAT CTGCTGCACG CCCTGGGCGG GCTGCCGCAG
CTCGCGCGGG CCGCCCCCAG CGAGCTGCTC GAGGTGCCCG GCATCGGCGC GGCGCGGGCC
TCGCGCGTAG CCGCGACCTT CCACCTCGGC CGCCGGGCGC TCGAGGCCTC GGCCGCGGCG
CCCGTGGTCG TGCGCAACCC GCGCGATCTC TACGAGCGGC TGCGGCTGCG GCTGCGCGGG
CTATCGCAGG AGGTGTTCCT GGTCATCGCG CTCGATCCGC GCAACGTGAT CATCGAGGAG
ATCGAGGTCG CGCGCGGCTG TCTCACCGGC GTCGACGTGC ACCCGCGCGA GGTCTTCCGG
CCGCTGATCC GGCGCGGAGC CGCGGCCGCG GTGGTGGCGC ACAACCATCC CTCGGGCGAC
CCCGCGCCCA GCGCCGAGGA CATCGCGCTC ACCCGGCGGC TGTGCGAGGC CGGCGATCTG
CTCGGCATCC CGCTGCTCGA CCATCTGGTG CTGGGCGCGT GCAATTGCGC CTCGGTTTTC
GAGCTCTTGG GCATGCGCTG A
 
Protein sequence
MALLNLYDIA DLPRERFLAY GGERVSNAEL LALILGTGTR GRNVLELAEH LLHALGGLPQ 
LARAAPSELL EVPGIGAARA SRVAATFHLG RRALEASAAA PVVVRNPRDL YERLRLRLRG
LSQEVFLVIA LDPRNVIIEE IEVARGCLTG VDVHPREVFR PLIRRGAAAA VVAHNHPSGD
PAPSAEDIAL TRRLCEAGDL LGIPLLDHLV LGACNCASVF ELLGMR