Gene Hoch_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0144 
Symbol 
ID8542523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp214382 
End bp214840 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID646384940 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003264678 
Protein GI262193469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT CCGCCACCCC GCATCCCGAG CCGCACACCG TGCCGCCGCC AGAGATCGAG 
GCCCAGTTCT CGGATCTCCA CGACGGCAGC CTGGGCGCCG ACGAGGCCCG CGCGCTCGAG
TCCCACCTGC AAGGCTGCGA CGCCTGCCGC GCGGCCTACG ACGAGTTTTG CAGCGCCGTG
GACGCGCTCG CCGGGATGCA CAAGATGTCG GCGCCCCAGC ACTTCGAGCG CGAGGTCGAA
GAGACCATCC GCCGGCGCAG CGGCGGGCGC TTCTTCGGCC GCAAGGCCTT TGGCGAGCGC
GTGCCCTTCG AACTCATCGC CGTCGTCGTG CTGGTCTTCG GGCTGGTCAT CTTCTTCGCC
ATCCGCTCGT CGCAGACCGG CTCGCTGCGC TACGAGCAGC CGTCCGAAGA GCCCGCCATC
GACCCGGCCG CCGCCGACGT GCTGCTGCCG CGCATGTAG
 
Protein sequence
MSDSATPHPE PHTVPPPEIE AQFSDLHDGS LGADEARALE SHLQGCDACR AAYDEFCSAV 
DALAGMHKMS APQHFEREVE ETIRRRSGGR FFGRKAFGER VPFELIAVVV LVFGLVIFFA
IRSSQTGSLR YEQPSEEPAI DPAAADVLLP RM