| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0135 |
|---|
| Symbol | |
|---|
| ID | 8542514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 206276 |
|---|
| End bp | 206746 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646384931 |
|---|
| Product | Biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_003264669 |
|---|
| Protein GI | 262193460 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATGC AAGTGGGCGG TTCGCAGGGC GGCGACGGTC TCAACAGCGA GATCAACGTC
ACCCCCTTCG TCGACGTCAT GCTGGTGCTG CTGGTGATCT TCATGATCAC GGCGCCCATG
CTCAACACCG GCGTCGACAT CACCTTGCCT CAGATCGCGG CCCAGAATAT CGAGGACCCC
GAGGGCAAGC TGATCCTCAG CATCGATAAG AATCAGCGCC TGCTGCTGGG CAAGAGCCCG
GTGCAGTGGG CAGAACTTTC GGACAAGCTG TCGACCAACC GCCGGGTACA GACCGAGAAG
GAGCTGTACA TCGAGGCCGA GCAGAGCCTG CCCTACGGCG TGGTGGTCAC GGCCATGGCC
ACGGCCAAGA GCGCCGGGGT CGAGCGGGTC ATGATGCTCA CCGATCCCTC CGAGCAGCTC
GACCTGTCCG AACTCGACCG CGCGGTCGGC AACGCCGCGC CGACGGAGTG A
|
|---|
| Protein sequence | MGMQVGGSQG GDGLNSEINV TPFVDVMLVL LVIFMITAPM LNTGVDITLP QIAAQNIEDP
EGKLILSIDK NQRLLLGKSP VQWAELSDKL STNRRVQTEK ELYIEAEQSL PYGVVVTAMA
TAKSAGVERV MMLTDPSEQL DLSELDRAVG NAAPTE
|
|---|
| |