Gene Hoch_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0130 
Symbol 
ID8542507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp201016 
End bp202140 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID646384924 
ProductBeta-ketoacyl-acyl-carrier-protein synthase I 
Protein accessionYP_003264664 
Protein GI262193455 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAG GAACCGCGAT CACGGGGACA GGTATCCACG TATCCGAGAA CGTCGTATCC 
AACGAGGAGC TATGTGCGAT TTTCAATGCC TACGTGCAGC GTGAAAATCA GCGCAACGCG
GCCGCGATCG CGGCCGGCGA GGCCCAGCCG CTCGCGGAGT CGAGCCCGGC CTTCATCGTC
AAAGCCTCGG GCATCGAGCG CCGGCACGTG GTCGATGCCG AGGGCATCCT CGACATCGAT
CGGATGACGC CCAACATTCC CGACCGCCCC GACGACGAGC TGTGCGTGCA GGCCGAGTAT
GCGGTCCGCG CCGCCGAGAA GGCGCTGGCC GCGGCCGGCC GCGCGGCCGA GGAGATCGAC
CTGGTCATCC TCGCCACCTC GACGCTGCAG CGCCCGTATC CGTCGATCAG CGTCGAGATC
CAGCACGCGC TCGGCGCCCG CGGCTACGCC TACGACATGA CCATGGGCTG CTCCTCGGTC
ACCTACGGCA TCCGCGCCGC CAGCGACGCC ATCCGCTGCG GCCACGCCAA GCGGGCGCTG
GTGGTCAACG CCGAGCTCTG CACGCCCTTC GCCGACTTCC GCGACCGCGA CTGCCACTTC
ATCTTCGGCG ACGCCGGCAC CGCCGTGCTC GTGGAGCCCT GCGACGACGT GGCCCGCGCG
GGCGCCTTCG AGATCCTCTC GAGCCGCGCC TTCGCCAGCT ACTCGAACAA CATCCGCAAC
AACATCGGCC ACATCAACCG CTGCGACCCG GACAACCAGC ACGCGCGCGA CAAGCTCTTC
TACCAGCAGG GGCGGCGGGT GTTCAAAGAC ATCGTGCCGC TGGCCTCGCG CTTCATCCTC
GACCATCTCG AGGCGCACGA GCTGGCCCCG CAGGACATCG CCCGCTTCTG GCTGCATCAG
GCCAACAGCA ACATGAACGA CCTCATCGCC AAGCGCGTGC TGGGCCACGA GCCCAGCACC
GAGAGCGCGC CCCTGGTGCT CGCCGAGTAC GGCAACACGG CCTCGTCCGG TTCCATCATC
GCCTTCGACC AGCACCACGA GGATCTCGCC GCGGGCAGCT ACGGCTTCCT GTGCTCCTTC
GGCGCCGGTT ACTCGATCGG CAGCGCGCTG CTGCGCCGCA TGTGA
 
Protein sequence
MSTGTAITGT GIHVSENVVS NEELCAIFNA YVQRENQRNA AAIAAGEAQP LAESSPAFIV 
KASGIERRHV VDAEGILDID RMTPNIPDRP DDELCVQAEY AVRAAEKALA AAGRAAEEID
LVILATSTLQ RPYPSISVEI QHALGARGYA YDMTMGCSSV TYGIRAASDA IRCGHAKRAL
VVNAELCTPF ADFRDRDCHF IFGDAGTAVL VEPCDDVARA GAFEILSSRA FASYSNNIRN
NIGHINRCDP DNQHARDKLF YQQGRRVFKD IVPLASRFIL DHLEAHELAP QDIARFWLHQ
ANSNMNDLIA KRVLGHEPST ESAPLVLAEY GNTASSGSII AFDQHHEDLA AGSYGFLCSF
GAGYSIGSAL LRRM