Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0130 |
Symbol | |
ID | 8542507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 201016 |
End bp | 202140 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646384924 |
Product | Beta-ketoacyl-acyl-carrier-protein synthase I |
Protein accession | YP_003264664 |
Protein GI | 262193455 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAG GAACCGCGAT CACGGGGACA GGTATCCACG TATCCGAGAA CGTCGTATCC AACGAGGAGC TATGTGCGAT TTTCAATGCC TACGTGCAGC GTGAAAATCA GCGCAACGCG GCCGCGATCG CGGCCGGCGA GGCCCAGCCG CTCGCGGAGT CGAGCCCGGC CTTCATCGTC AAAGCCTCGG GCATCGAGCG CCGGCACGTG GTCGATGCCG AGGGCATCCT CGACATCGAT CGGATGACGC CCAACATTCC CGACCGCCCC GACGACGAGC TGTGCGTGCA GGCCGAGTAT GCGGTCCGCG CCGCCGAGAA GGCGCTGGCC GCGGCCGGCC GCGCGGCCGA GGAGATCGAC CTGGTCATCC TCGCCACCTC GACGCTGCAG CGCCCGTATC CGTCGATCAG CGTCGAGATC CAGCACGCGC TCGGCGCCCG CGGCTACGCC TACGACATGA CCATGGGCTG CTCCTCGGTC ACCTACGGCA TCCGCGCCGC CAGCGACGCC ATCCGCTGCG GCCACGCCAA GCGGGCGCTG GTGGTCAACG CCGAGCTCTG CACGCCCTTC GCCGACTTCC GCGACCGCGA CTGCCACTTC ATCTTCGGCG ACGCCGGCAC CGCCGTGCTC GTGGAGCCCT GCGACGACGT GGCCCGCGCG GGCGCCTTCG AGATCCTCTC GAGCCGCGCC TTCGCCAGCT ACTCGAACAA CATCCGCAAC AACATCGGCC ACATCAACCG CTGCGACCCG GACAACCAGC ACGCGCGCGA CAAGCTCTTC TACCAGCAGG GGCGGCGGGT GTTCAAAGAC ATCGTGCCGC TGGCCTCGCG CTTCATCCTC GACCATCTCG AGGCGCACGA GCTGGCCCCG CAGGACATCG CCCGCTTCTG GCTGCATCAG GCCAACAGCA ACATGAACGA CCTCATCGCC AAGCGCGTGC TGGGCCACGA GCCCAGCACC GAGAGCGCGC CCCTGGTGCT CGCCGAGTAC GGCAACACGG CCTCGTCCGG TTCCATCATC GCCTTCGACC AGCACCACGA GGATCTCGCC GCGGGCAGCT ACGGCTTCCT GTGCTCCTTC GGCGCCGGTT ACTCGATCGG CAGCGCGCTG CTGCGCCGCA TGTGA
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Protein sequence | MSTGTAITGT GIHVSENVVS NEELCAIFNA YVQRENQRNA AAIAAGEAQP LAESSPAFIV KASGIERRHV VDAEGILDID RMTPNIPDRP DDELCVQAEY AVRAAEKALA AAGRAAEEID LVILATSTLQ RPYPSISVEI QHALGARGYA YDMTMGCSSV TYGIRAASDA IRCGHAKRAL VVNAELCTPF ADFRDRDCHF IFGDAGTAVL VEPCDDVARA GAFEILSSRA FASYSNNIRN NIGHINRCDP DNQHARDKLF YQQGRRVFKD IVPLASRFIL DHLEAHELAP QDIARFWLHQ ANSNMNDLIA KRVLGHEPST ESAPLVLAEY GNTASSGSII AFDQHHEDLA AGSYGFLCSF GAGYSIGSAL LRRM
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