| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0118 |
|---|
| Symbol | |
|---|
| ID | 8542495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 183172 |
|---|
| End bp | 185247 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646384912 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003264652 |
|---|
| Protein GI | 262193443 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA CTCTACCGGG CGGCCTTGCT ATCGTCTCAT CATTTTTCCT ATTCACCTCT
TATGCATCTG CCGATGACCA GATCTATTTC GTCGACGTCA CCGATCAGCC CAATATGGGA
CTCTCGAGTT ACCAGCGAAC GGGCACTCCC GCGCACGTCG CCGCGGCCGA AGAGCTACAT
CAGCGATCGC TGATCGAGCC GGCCACTCCG GCCGACATCG CGGCCGGTCC CATGATGCCG
CGCGGCCTCG CCGGCGTGGC CATCTTCGAC TACGACAATG ACGGCGATTT CGATATCTAC
GCGACCAACG GCGCCGGCTC GAGCAACAGC CTGTTCCGCA ATCGCCTGGC CCAGACCGGC
GAGCTCGGCT ACGACGATGT CGCCGCTCAG GCCGGCGTCG CCGCCACCGC ACAGGACAGC
TTCGGCACCT GCTTTGGCGA CATCGACAAC GACGGCGACC ACGACCTGAT GGTCCTGGGC
CGCGCGGAAG CCAACCGCCT GTTCGAAAAC CAGGGCGACG GCAGCTTCGT GGAGCTACCC
GGGGCTGGCG TCGGTGGCGG CGCACGCAGC TCGACGAGCT GTTCCATGGG CGACATCGAC
AACGACGGCC GCCTCGACAT CGTGGTCGCC AACGCCTTCG ACATGCGCCA CTCCTTCGCC
ATCTTCGCGG TGCCCTACGC GCTCAACGAG CACAATCAAC TGCTGCGCAA CCTCGGCGGC
AACACCTTCG AGGACGTGAG CGAGAGCTCG GGCATCACGC TCAACCTCGG CTATCCCGAG
GCCGCGGCCG GCATCACGTG GACGGCCGCC ATGGCCGATC TCAACCGCGA CGGCGCCACC
GATATCGTCT TCATGGACGA CCAAGGCGGC ATCCTGGCCG AGCGCGTCGG CGGCGAAGAC
CGCGCCTACA TCCACGTATT CCTCAACGAC GGCGCCGGCC ACTTCGCCGA CCAGCCGCTC
ATCCTCAACG AGTATTCGGC CTCCGAGTGG ATGGGAGTTA CCTTTGGAGA TCTCGACTGC
GACGGCGACG TCGATATGTT CGCCACCAGC TTCGGCGATT ACGAGAATCC GATCTTTGGT
TTGCCCTACC TGCGCGGCGG CAGCACCAGC CGGCCATATT ACAACAATGG TGATGGCAGC
TTCACCGACG GGGTATTTCA ATTCGGAGTT GCGGCCACGC CCTTTGGTTG GGGCGCTGCG
ATCTTCGATT ATGACAACGA CGGCGACAAC GACATCCTGT ATCACGGCGG CCTCGACGCC
GCGAACATGA TCGTGCTGGC CTCCAACCCC GGCGTGGTGC TCGAAAACCA GGGCTGCTCG
GGCGTCTTCG AGCCCGACAC CACCGCCATC ACCACCGACC ACCTGCGCCG CAACGTGCGC
GGCGTGGCCG TGGGCGACAT CGACCGCAAC GGCTTCGTCG ACGTGGTCAC GGCCGCCAAC
TTCCGCGTGC CCGACGAGGT CGAGCTAGAG CCCCTGCCGG TGCAGTACGG CGACGCCTAC
GACGGCACCG CCCTGTACGT GGCGGTCATG GAATTGATCA ACGGCGACTT CTCCAACCCG
CTGCGGGTGT GGACCGGCTT CGAGAACCAG CTCGGCAACC TCAAGCTCGA GCTCAACGGC
GGCAACGGCA ACCACTGGCT GCGGGTGCGC GCGCTCGGCA GCGCCGGCGT GCTGCCCGCG
GGCGAGGTCA ACCGCGACGG CATCGGCGCG CAGCTCAGCT TCACCCCGCA GGGCGGCCAG
CGCAGCACCC AGATCGTGGT CGGCGGCTCC AGCCACAGCT CGCAGCACGC GCTCGAGAAG
GTCTTCGGCT TGGCCCGCGC CAAGAAGGGC ACGCTCGAGG TCCTGTGGCC GGGCGGCACC
CGCAACCGGC TGTACGGCGT GCGCGCCGGC GACGACGTCC TGCTGCCCGA GCTGCCGTGC
AGCTTCGACG CCGACTGGGC GCACTTCTCC GACTACAAGC GCTGCGTGTC GCAGGCCCTC
AACGGCCTCG TGGACGCCGG CGTCCTCAGC CGCGGCGACC GCGGCCAGTT CCAGAGCAGC
GCGCTGCGCG CGTACCACGA ACACCGCGGC CAGTGA
|
|---|
| Protein sequence | MKRTLPGGLA IVSSFFLFTS YASADDQIYF VDVTDQPNMG LSSYQRTGTP AHVAAAEELH
QRSLIEPATP ADIAAGPMMP RGLAGVAIFD YDNDGDFDIY ATNGAGSSNS LFRNRLAQTG
ELGYDDVAAQ AGVAATAQDS FGTCFGDIDN DGDHDLMVLG RAEANRLFEN QGDGSFVELP
GAGVGGGARS STSCSMGDID NDGRLDIVVA NAFDMRHSFA IFAVPYALNE HNQLLRNLGG
NTFEDVSESS GITLNLGYPE AAAGITWTAA MADLNRDGAT DIVFMDDQGG ILAERVGGED
RAYIHVFLND GAGHFADQPL ILNEYSASEW MGVTFGDLDC DGDVDMFATS FGDYENPIFG
LPYLRGGSTS RPYYNNGDGS FTDGVFQFGV AATPFGWGAA IFDYDNDGDN DILYHGGLDA
ANMIVLASNP GVVLENQGCS GVFEPDTTAI TTDHLRRNVR GVAVGDIDRN GFVDVVTAAN
FRVPDEVELE PLPVQYGDAY DGTALYVAVM ELINGDFSNP LRVWTGFENQ LGNLKLELNG
GNGNHWLRVR ALGSAGVLPA GEVNRDGIGA QLSFTPQGGQ RSTQIVVGGS SHSSQHALEK
VFGLARAKKG TLEVLWPGGT RNRLYGVRAG DDVLLPELPC SFDADWAHFS DYKRCVSQAL
NGLVDAGVLS RGDRGQFQSS ALRAYHEHRG Q
|
|---|
| |