Gene Hoch_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0117 
Symbol 
ID8542494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp182237 
End bp183115 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content71% 
IMG OID646384911 
ProductSpoIID/LytB domain protein 
Protein accessionYP_003264651 
Protein GI262193442 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2385] Sporulation protein and related proteins 
TIGRFAM ID[TIGR02669] SpoIID/LytB domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAT TCCGGGTCGG CTGCTGTGCC GCGGCGTTCG CGATCGCGTT CGCGCTCGCT 
GCGTGCAGTG ACGAAGATCC GGTCGAGATC GAGCGCGACG GCCTCGACGA GGCCTACTGC
CAGGCCCTGG TCACCGGCTA CCCGCTGGTC GATGTCGAGA GCGAATATCT GCCCCGCGTG
GTCCAGTGCG AGAACGGCAA CGCCGGCTTC GAGGCATTAA AAGCCCAGGC CGTCGCCGCG
CGCGCCTATC TCTATTACAA ACTCGACCAG GCGGGCGAGA TCGCCGACGG CCCGCAAGAC
CAAGTCTACG GCTGCGGGCG CGCGCCGTCG CCGCGGGTCC ACGCCGCCGT GCGCGCCACC
AGCGGCGAGA TCCTCACCTA TCGCGGCTTC CAGGTCGCCG GCTTCTACGT CGCCGGTGCC
AAGCTGCGGC CGCCGAGCTG CACCACCGAC GACAAGCTGC CCAGCCGCCT GGCCGTCGAG
GACCCCTTCG GCACCGAACA TTACGTGACC TACAACGAGG GCCGCAGCGG CGAGGACATC
GAGCAGACCA CGCTCGGGCT GGTCAATCCC GCCAACCGCT CCAACCGCGG CGCCAAATCG
CAGAACGGCG CCGCGTGCCT GGCCGCCAAG GGATGGAACT ACGAGGAGAT CCTGCGCTTC
TACTACGGCG CCGACATCGA ACTCGTCCAG ACCTCGGGCC CCTGCGTGGT GCCCGCGGCC
GAGCGCAGCG TGCGCCCGGG CAGCCGCGGA AGCGCGTGGA TCGGGGCCGC CGCCATGGTG
CTGGCCCTGG TCATCGGCTG GATGCTCATC GCCACCGCGC TGCGCACGCG CAGCCCGGGC
GGCCGCTCCC GTCGCCGCGG CCGAGCGCGC CGGCGCTGA
 
Protein sequence
MRAFRVGCCA AAFAIAFALA ACSDEDPVEI ERDGLDEAYC QALVTGYPLV DVESEYLPRV 
VQCENGNAGF EALKAQAVAA RAYLYYKLDQ AGEIADGPQD QVYGCGRAPS PRVHAAVRAT
SGEILTYRGF QVAGFYVAGA KLRPPSCTTD DKLPSRLAVE DPFGTEHYVT YNEGRSGEDI
EQTTLGLVNP ANRSNRGAKS QNGAACLAAK GWNYEEILRF YYGADIELVQ TSGPCVVPAA
ERSVRPGSRG SAWIGAAAMV LALVIGWMLI ATALRTRSPG GRSRRRGRAR RR