Gene Hoch_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0115 
Symbol 
ID8542490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp180690 
End bp181370 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID646384907 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_003264649 
Protein GI262193440 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTT CGCTCTCCCG CCCGGGAGAA GAACAGCCCT CAGCCAAACA AGCCCTGCGC 
GATCGCGTGT GCCGTCTGCG GCGCGCGATC TCGCGCGAGG CCGGGCTCTG CGCAGCACGC
GCCGCGGCTG AGCTGGTGTT GTCTCTGCCG GAGCTGGAGA GCGCCCGCGC GGTCGGCCTG
TACGCCGCGC TGCCGGGTGA GCTGAGCACC GACGAGCTCG CCGAGGCCCT GCGCCAGCGC
GGCGTCGTCG TGGCCTATCC GCGCATCGTG CCCGGCACCC GCGCCCTGTG CTTTCACCGC
GTCGCCGATC CCGCCGCCAT GATCGCGGGC CCCTTCGGCA TCACCCAGCC CGCGGCCGAC
GCGCCCGAGA TCGCAGTCGT CGAGCTCGAC CTGCTGGTCG TCCCCGGGCT CGCCTTCGAC
CTCCACGGCG GCCGCCTGGG CTGGGGTAAA GGCTTCTACG ACACCACCCT GGCGACCCCG
GGCGGTCCGC TGCGCGTGGG ATTCGCGCAC GCCTGCCAGA TCGTCGAAGC CGTGCCGTGT
ATGGCGCACG ACGTCCCCAT GGACATCGTG GTCAGCGACA CCGGCATCCT GCGCGTGCGT
GAGCCGAATT CGCCACCCGC GCCCTCCTCT TCACAACCAC AGCGAGGCGC TCGCGATCGC
CGCGAGGAGC CTCCAGCCTA A
 
Protein sequence
MTTSLSRPGE EQPSAKQALR DRVCRLRRAI SREAGLCAAR AAAELVLSLP ELESARAVGL 
YAALPGELST DELAEALRQR GVVVAYPRIV PGTRALCFHR VADPAAMIAG PFGITQPAAD
APEIAVVELD LLVVPGLAFD LHGGRLGWGK GFYDTTLATP GGPLRVGFAH ACQIVEAVPC
MAHDVPMDIV VSDTGILRVR EPNSPPAPSS SQPQRGARDR REEPPA