Gene Hoch_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0114 
Symbol 
ID8542489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp179070 
End bp180632 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content67% 
IMG OID646384906 
Productmetal dependent phosphohydrolase 
Protein accessionYP_003264648 
Protein GI262193439 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCC TTTACGTCAT TCTGGCCATC CTCGGCGGCA TAACCGTCGG GGTGGGAATC 
GCGCGGCTCG CCGGCATTGG CCGCAACGCC GCGGCTGAGC GCGCCGCCGA GGCCGAGGCC
CGCAGGATCA TCACCGCCGC CGAGGCCGAG GTCGAGGAGA TCAAAAAGGC CGCCGAGGTC
GAGGGCAAAG AGCTGGCCTT CCGGCTCAAA GCCGACGTCG AAGAGGGCAC CCGCAAACGC
AGGGCCGAGC TCGTCCAGCA GGAGGAAGCG CTGCTGGCGC GCGAGCGCGA GATGGAGCGC
AAGCAAAAGG ACGCCAGGCG CCTCGAGGGC GAGCTCGAGA AGCGCGAGCG CTCGATCGAT
GGCCGCGCCA AAGCCGCCGA GGCCATGGCG CGCAAAGCCG AGGCCTCGCA GGACAAGGCC
AAAGCCATGC TCGAGGAGAT CGCGGCGCTG ACCGCCGAGC AGGCGCGCGA GCGGCTCGAG
GATCAGATCC GCGAGCAGGC GCGCGAAGCC GCAGCCGCCG AGGTCAAACT CATCGAGGAG
AACGCGGCCA AAGAGGCCGA CTCGCGCGCC AAGGAGATCG TGGCCACCGC GATTCAGCGC
TACGCCAGCG AGCTGGTGCA GGAGCGCACA GTGTCGGTCA TCCCCCTGCC CTCGGACGAC
ATGAAAGGCC GGCTGATCGG TCGCGAGGGT CGCAACATCC GCGCGCTCGA GGCCGCCACC
GGCATCGACA TGATCATCGA CGACACCTCG GAGGTGATCA CCATCTCGTG CTTCAACCCC
GTGCGCCGCG AGATCGCGCG CCTGGCCATC TCCAAGTTGG TCGCCGACGG CCGCATCCAC
CCCACGCGCA TCGAAGAGGT GGTCAAGAAA GCCGAAGCCG AGATCGAGCG CACCTGTAAA
GAGGCCGGCG AGCAGGCGGT GTTCGACCTC GGCTTGCACC GCGTCTCGCC CGAGCTGATC
GTGCAGCTCG GACGCCTCAA GTACCGGGCC TCGTACGCGC AGAACCTGCT CATGCACTCG
GTCGAGGTCG GCTTCCTCGC CGGGCTGATG GCCGCGGAAG TGGGCCTCAA CGTCAAGCAG
GCGCGCCGCG CCGGACTGCT ACACGATATC GGTAAATCGG TGGATCACGA GCTCGAGGGC
TCGCACGCGC AGGTGGGCGC ACAGATGGCG CGCAAGTTCG GCGAGTCGGC CAAGATCTGC
CAGGCCATCG CCGCGCACCA CGGCGACCCC GAGCCGAGCA GCGTTCTCGA CCACATCGTC
GACGCTGCCA ATCGGCTTTC GTCCGCGCGT CCGGGAGCGC GTCGCGAGCT GCTCGCCTCC
TACGTGCAGC GGCTCGAAAA GCTCGAGCAC ATCTGCAACG GCTTTGGCGG CGTGACCAAA
TCCTTCGCGC TTCAGGCCGG GCGCGAAGTG CGCGTGATGG TCGAAAACGA CAAAGTCGAT
GACGCCCAGG CGCTCATGCT GTCGAAGGAC ATCGCGCGCA AAATCGAGAC CGAAGCCACC
TACCCGGGTC AAATCCGCGT GGTCGTGGTA CGCGAGACCC GCGCCAGCGA TTACGCGCGT
TGA
 
Protein sequence
MQFLYVILAI LGGITVGVGI ARLAGIGRNA AAERAAEAEA RRIITAAEAE VEEIKKAAEV 
EGKELAFRLK ADVEEGTRKR RAELVQQEEA LLAREREMER KQKDARRLEG ELEKRERSID
GRAKAAEAMA RKAEASQDKA KAMLEEIAAL TAEQARERLE DQIREQAREA AAAEVKLIEE
NAAKEADSRA KEIVATAIQR YASELVQERT VSVIPLPSDD MKGRLIGREG RNIRALEAAT
GIDMIIDDTS EVITISCFNP VRREIARLAI SKLVADGRIH PTRIEEVVKK AEAEIERTCK
EAGEQAVFDL GLHRVSPELI VQLGRLKYRA SYAQNLLMHS VEVGFLAGLM AAEVGLNVKQ
ARRAGLLHDI GKSVDHELEG SHAQVGAQMA RKFGESAKIC QAIAAHHGDP EPSSVLDHIV
DAANRLSSAR PGARRELLAS YVQRLEKLEH ICNGFGGVTK SFALQAGREV RVMVENDKVD
DAQALMLSKD IARKIETEAT YPGQIRVVVV RETRASDYAR