Gene Hoch_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0098 
Symbol 
ID8542469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp149932 
End bp150546 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content70% 
IMG OID646384886 
ProductRDD domain containing protein 
Protein accessionYP_003264632 
Protein GI262193423 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAC GCGAGCCCTC GGATGAGCGG GGGCACAAGG ACGGAGACGC TGCCCCCGGG 
ACCGCGGAGG AGACGCCGAA GAATACGGAG GCGTCTCGCC CCGCGGCCGC GTCTCGCAAA
CGCGCGCCCA CGCAAGGGGG GCGCGCGGCG GCACCTCGAT TCCACGCCGG CGGCCTGTGG
CGTCGCCTGG GCGCGGCCAT GGTCGATCTC GCCGTGATCG TTCCCGTCGC CCTGATCCTG
GCCTGGTTCG CCGGCCAGCT CACGGGCGTG CACTTGCCCG ACAGCCGCAA CTACGGCGTC
GATTTCTGGC TCGATCTGAT GCTGGGCAAC GATCCGGCGC TGCTCGGCTT CTTCGGTCTG
CTGTTGGCCA CGGCGCTGAT CTACGTGGCC ATCTTCCAGG TGACCTGGGC GGCGACGCCC
GGTATGCGCG TGCTCGGGCT GGGCATCATC GACCTGTACG GCGATGCGCC CTCGGTCACG
CGCGTGGTCG CGCGCACGGC CGGCTATCTG GCGGCGACCG CGACCCTGGG CCTGGGCTTC
CTGTGGATCG GTTTCGACAG GGAGCGGCGC GGGCTGCACG ATTGGATATC GGGAACCCAC
GTCGTCAAGG TGTAG
 
Protein sequence
MSQREPSDER GHKDGDAAPG TAEETPKNTE ASRPAAASRK RAPTQGGRAA APRFHAGGLW 
RRLGAAMVDL AVIVPVALIL AWFAGQLTGV HLPDSRNYGV DFWLDLMLGN DPALLGFFGL
LLATALIYVA IFQVTWAATP GMRVLGLGII DLYGDAPSVT RVVARTAGYL AATATLGLGF
LWIGFDRERR GLHDWISGTH VVKV