Gene Hoch_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0090 
Symbol 
ID8542461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp141686 
End bp142213 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content65% 
IMG OID646384878 
ProductYceI family protein 
Protein accessionYP_003264624 
Protein GI262193415 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.108082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGT ACGACGCGTC CACTGCAGAG TGTCTGGTGT TCACATACAA AGACGGGCTG 
CTCTCGCGGC TCGGTCATGA TCTGAAGCTG CGCGTGACCA GCTTCGAGGT CGAGGCCGAC
GAGGCCGCGC CCTCGGTGTC GGCGAGCTTC GATGCGTCAT CGCTGCGCGT CGATTGCGCC
GTGGTCGACG GCGAGGAGAA TCCGCATCTG CTCACCGGCG TCGATCAGAA GAAGATCGCC
GGGCAGATCG CCCACGATGT GCTGCACGCC GAGAAGTTCC CCGAGGTGCG CTTCACCTCG
TCGAAGCTGA GCAAGCGCGA CGATGGCGGC TACGACATCA CCGGCACGCT CACGCTGCAC
GGCGTGGCCA AGGAGATCAG CATCCGCTCG CAGCCCGAGG ACGGCAAGCA GGTGGTCGAT
TTCACCCTGC ACCAGCCCGA CTACGACATC TCGCCGTACC GCGCGGTGAT GGGCACGCTC
AAGATCAAGC CCGAGGTGCG CGTGCGCCTG GCGCTGCCGG TCGCCTGA
 
Protein sequence
MAKYDASTAE CLVFTYKDGL LSRLGHDLKL RVTSFEVEAD EAAPSVSASF DASSLRVDCA 
VVDGEENPHL LTGVDQKKIA GQIAHDVLHA EKFPEVRFTS SKLSKRDDGG YDITGTLTLH
GVAKEISIRS QPEDGKQVVD FTLHQPDYDI SPYRAVMGTL KIKPEVRVRL ALPVA