| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0088 |
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| Symbol | |
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| ID | 8542459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 138763 |
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| End bp | 140271 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646384876 |
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| Product | Amidase |
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| Protein accession | YP_003264622 |
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| Protein GI | 262193413 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.777879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCT TTTCCGAGTA CACGCGCTAC GACGGCGTCG GCCTGGGCGA GCTGGTGCGC
GCCGGCGAGG TCCAGGCCAG CGAGCTGGTC GAGGCCGCCA TCGCCGCCAT CGAGGCCGTC
GATCCGCAGC TCAACGCGGT CGTGCATCGC TTCTTCGATC GCGCCCGCCA AGCCGCCCAA
GCAGCCGCCC AAGCGCCGCT GCCGAAGGGG CCGCTGGCCG GCGTGCCGGT GCTCGCCAAA
GACCTGCTGT TCCTGCTCGA GGGGCTGCCC ATGAGCGCCG GCAGCCACGC GGTGCACGGC
TTCGTGGCGC CGCGCGACAG CACCTTGGCC AGGCGCTACC GCGACGCCGG CATGCTCATC
CTCGGGCGCA CCAACACCCC CGAGCTCGGC CTGTCGCCGG TGACCGAGCC GGCGCTGTTC
GGCCCCACGG CCAACCCCTG GGACCTGGGC CGCAGCCCGG GCGGCTCCAG CGGCGGCTCG
GCCGCGGCCG TGGCCGCGCG TCTGGTGCCC ATCGCCACCG GCAGCGACGG CGGCGGCTCG
CTGCGCATCC CGGCCGCCGC CTGCGGCGTG TTCGGCTTCA AACCCTCGCG CGGGCGCACG
CCCTCCGGCC CCGAGCGCGG CGATCTGTGG GCCGGCCTGG CGGTCGAACA CGTGCTCACC
CGCTCGGTGC GCGACAGCGC CGCGGTCCTC GACCTCACCG CCGCCCCCGA GCCCGGCGCC
CCCTACGCCG CGCCCACGCA GACGCGCCCC TACCTCGACG AGGTAACCAC CGCGCCCGGC
CGCCTGCGCA TCGCGTTTAC CGCACAGCCG CTGGTCGGCT CGCGCGTCGA CGCCGACGCC
GCGGCCGCGG TCGAGTCCGC GGCCCGGCGC CTGGAGGAAC TCGGACACAC GGTCGAAGAA
GCCGCCCCCG ACATCGACCG CGCCGCCTTC ATGCGCGCCT ACCTGAGCGT GGTCTCGGTG
CAGATCGCGG CCGAACTCGA CGAGGTCGAA GCCGTTGTCG GACGATCGGT CGGTCACAAG
GTCGAGCCCA CCACGCGCGC CATGCAGCTC TTTGGCCGCC ACCTCTCGGC GCCCGAGTAC
GAGGCCTGCG TGCGCCACCT GCACCGCGTC ACCCGCGACA TCGCCGGCTT CTTCGGCGAG
CGCGATGTGC TGCTCACGCC CACACTCCCC GGCGCCGCCG GCGTCACCGG CGCGCTGCAA
CCCACGCGCA GCGAGCACGC GCTGCTGCGC GCCGTGCACA CGCTGCGCGC CGGCTCGCTG
CTCAAACACC TGCGCCTGAT CGACCTGCTG GCGCCGCGGG TCTTCGACCT GGTCGGCTTC
ACCGCGCTGT TCAACGCCAC CGGTCAGCCG GCCATGTCGA TGCCGCTGCA CTGGAACGCG
GCCGGCTTGC CCGTGGGCGT GCAGTTCGCG GCCCGCTACG GCGACGAGGC CACGCTCTTC
CGCCTCGCCG GGCAGCTCGA GGCCGCGTGC CCCTGGGCCC AGCGGCGCCC ACCGGTATGC
GCGAGCTGA
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| Protein sequence | MSGFSEYTRY DGVGLGELVR AGEVQASELV EAAIAAIEAV DPQLNAVVHR FFDRARQAAQ
AAAQAPLPKG PLAGVPVLAK DLLFLLEGLP MSAGSHAVHG FVAPRDSTLA RRYRDAGMLI
LGRTNTPELG LSPVTEPALF GPTANPWDLG RSPGGSSGGS AAAVAARLVP IATGSDGGGS
LRIPAAACGV FGFKPSRGRT PSGPERGDLW AGLAVEHVLT RSVRDSAAVL DLTAAPEPGA
PYAAPTQTRP YLDEVTTAPG RLRIAFTAQP LVGSRVDADA AAAVESAARR LEELGHTVEE
AAPDIDRAAF MRAYLSVVSV QIAAELDEVE AVVGRSVGHK VEPTTRAMQL FGRHLSAPEY
EACVRHLHRV TRDIAGFFGE RDVLLTPTLP GAAGVTGALQ PTRSEHALLR AVHTLRAGSL
LKHLRLIDLL APRVFDLVGF TALFNATGQP AMSMPLHWNA AGLPVGVQFA ARYGDEATLF
RLAGQLEAAC PWAQRRPPVC AS
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