Gene Hoch_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0084 
Symbol 
ID8542455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp132392 
End bp133102 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content71% 
IMG OID646384872 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003264618 
Protein GI262193409 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.667757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTCT TGCTCAGCCT CCAGACCGTC CTCGCGGCCG CGCGCGTGAC CGTGCCCTCG 
TTTGCCGAAG CCATGGCCGG CCGGCTCCAG CGCGACGACG CCGACCGCCG CCTGCGCTGG
TTCGGCGACC ACGTCGTGCG GCTCACGCGC ATGCAGCTCG AGGTCGAGGG CCGCGAGCGC
GTGCCCGTGG ACCAGCCCTA CGTGTACATG TCGAATCACC AGAGTCACTA CGACATCCCG
GTGCTGTACG CGACCGTGCC GACGCCGACC CTGCGCATGG TGGCCAAGGC CGAGCTGTTT
CGCATCCCGC TGTGGCGGCG CCCGCTCACG GCCGCCGAGT TCGTCGAAGT CGAGCGCGGC
AACCCCGAGC AGGCGCTCGA GAGCCTGCGC CGCGCCGAGG ATTCCATCCG CCGCGGCGTG
AGCATCTGGA TCGCGCCCGA GGGCACGCGC TCGCTCAGCG GCGCGCTCGG CCCGCTCAAG
AAGGGCGGGT TCCACCTGGC CAAAGAGACC GGTGTGGCCA TCGTCCCCGT GGCCATCGAC
GGCACCCGCG CGGTGCTGCC CTCGGGCGCG CTCACGACCA CGCCCGACTG CCCGGTGCGC
GTGGTTTTCG GCGCCCCGAT CGCGGTCGAA GGGCGCTCGA TCGCGGCGCT GATGGACGAG
GTGGGCGCGT TCTTGCAGAC GCATCTCGAG ACGCCAGCTT CACCGCACTA A
 
Protein sequence
MGLLLSLQTV LAAARVTVPS FAEAMAGRLQ RDDADRRLRW FGDHVVRLTR MQLEVEGRER 
VPVDQPYVYM SNHQSHYDIP VLYATVPTPT LRMVAKAELF RIPLWRRPLT AAEFVEVERG
NPEQALESLR RAEDSIRRGV SIWIAPEGTR SLSGALGPLK KGGFHLAKET GVAIVPVAID
GTRAVLPSGA LTTTPDCPVR VVFGAPIAVE GRSIAALMDE VGAFLQTHLE TPASPH