Gene Hoch_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0073 
Symbol 
ID8542444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp111277 
End bp112134 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content71% 
IMG OID646384861 
ProductGeneral secretory system II protein E domain protein 
Protein accessionYP_003264607 
Protein GI262193398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.559065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAAGC GTCTGGCCGA AATCGCAATC GATGGCAAGC TCGCGAGCCG AGAGCAGGTC 
ATCCGTGCCA CGCGCGAAGC CGAGTCGCAG GGCGTGCCGC TCATCGTCGA GCTGGTGCGC
TCGCTGGGCA TCGACGAGCT CGCCCTGGTC GCCGCCATCC GCCGCCAGGC GCGGGTGCCG
CTCATCGACC CGGGCGACCC CGCGCTCGCC GACATCGACA GCGAGGCCCT GCGCGAGCTG
CCCCAGGATG TGTGCCGCCG GCTGCGGCTG ATGCCGCTGG CGGTGTCGGT CTACGAGAGC
GGCACGCGGG TGCTGCGGCT GGCCATGGCC GACCCCACCG ACACCATCGC GCTCGCCGAG
ATCGAGTACC TCACCGGCTG CCAGGTCGAG GGCCAGCTCA TGTCGTTGTC GGCCGTCGAG
GAGCTGGTGC CGCGCAGCTA TCGCTCGTTC GTCACCAAGG TCATCCGCCG CGAACCCGCG
GCGGATTCGG CCGACATCGC CGCGGCGCCC GCGCGGCTCG CGGGGTCGGC GAGCGGCGAC
GGCGGCGGCG GCGGCCACGG CCTGGAGGTC GAGGTGCTGT TGCCGCCGAG CGAGGACCCG
GTACCCAGCG ACCTGGCGCA GAGCAGCGAT ACCCGGCGGG TGATCATCGC GCCCGCTGAC
GATCGCGGCG GCATGGCGCA GGCCTCGGGC GGCGAGCAGC CGACCACGGT GCCGTTTCAC
CGGATCACCG ATGAGGCCTC GCTAGAGCTG CGTCACAGCG CGTTGCTGCA GCTTTTGCTA
CGAAAACAGC TCATCACCGA GGCGGAGTAC GACGAAGAGA TCCGAACCTT GATGAAGCAG
CGCGCCGAAG AACCCTGA
 
Protein sequence
MPKRLAEIAI DGKLASREQV IRATREAESQ GVPLIVELVR SLGIDELALV AAIRRQARVP 
LIDPGDPALA DIDSEALREL PQDVCRRLRL MPLAVSVYES GTRVLRLAMA DPTDTIALAE
IEYLTGCQVE GQLMSLSAVE ELVPRSYRSF VTKVIRREPA ADSADIAAAP ARLAGSASGD
GGGGGHGLEV EVLLPPSEDP VPSDLAQSSD TRRVIIAPAD DRGGMAQASG GEQPTTVPFH
RITDEASLEL RHSALLQLLL RKQLITEAEY DEEIRTLMKQ RAEEP