Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0071 |
Symbol | |
ID | 8542441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 107795 |
End bp | 108859 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646384858 |
Product | thiamine pyrophosphate protein domain protein TPP-binding protein |
Protein accession | YP_003264605 |
Protein GI | 262193396 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.81164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCTT CGACTTCCAA CAAATCCGGT AACGGCAAGC TCATCAAGCT CAGCAAGAAG GACTTCGAGT CCGACCAGGA CGTCCGCTGG TGCCCGGGGT GTGGTGACTA CGCGATCCTC GCCACCGTCC AGCGCGCCCT GGCCAACCTC AAGGTCGAGC GCGAGAACAC GGTGTTCGTC TCGGGTATCG GCTGCTCCAG CCGCTTCCCG TACTACATGA ACACCTACGG GTTTCACAGC ATCCACGGCC GCGCCCCGGC CATCGCCACC GGCCTCAAGG TCGCCCGCCC CGAGCTCTCG GTGTGGGTGA TCACGGGCGA CGGCGACGGC CTCAGCATCG GTGGCAACCA CCTGATGCAC GCCATGCGCC GCAACGTGAA CCTCAACATC ATCCTGTTCA ACAACCAGAT CTACGGGCTC ACCAAAGGCC AGTACTCGCC CACCTCGCAG GTCGGCAAGA AGACGCCGAC CTCGCCGCTG GGTTCGGTGG ATCTGCCGGT CAACCCGCTG GCGCTGGCCA CGGGCGCGGG CACGACCTTC ATGGCCCGGG TCGGCGACAC CGACGCCAAG CTGTTCCTCA AGATCCTCGA GCGCGCCCAG GCGCACGAGG GCACCTCGCT CATCGAGGTG CTGCAGAACT GCCCGGTGTT CAACGACGGC GTGTGGAACG AGGTCACCGA CCGCAAGACC ATGGCCGACC GCCAGCTCGT GCTCGAGCAC GGCAAGCCGC TGGTCTACGG TAAGAACAAG GAGTTCGGCA TCCGCATGCG CAAGGACTTC ACCCCCGAGG TGGTCGAAGT CGGCGAGGGC AAGGTGCCCG AGAGCGAGCT GGTCGTGCAC GACGAGACGG GCTCGCCCGC GTACACGCAC ATGCTGGCGC TCATGAACTA CCCCGAGTTC CCGATCCCGG TCGGCGTGTT CCGCGCCGAG CCGCGGCCGT CGTACGACAG CATGGCGGTC GCCCAGGTCA AGACCGCGGT CGAGAGCCAG GGCCCCGCCG ACCTCAAGGC GCTGCTGTAC TCGGGCATGA CCTGGGAAGT CAGCCCCGAC GGCATCAAAC ACTGA
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Protein sequence | MSASTSNKSG NGKLIKLSKK DFESDQDVRW CPGCGDYAIL ATVQRALANL KVERENTVFV SGIGCSSRFP YYMNTYGFHS IHGRAPAIAT GLKVARPELS VWVITGDGDG LSIGGNHLMH AMRRNVNLNI ILFNNQIYGL TKGQYSPTSQ VGKKTPTSPL GSVDLPVNPL ALATGAGTTF MARVGDTDAK LFLKILERAQ AHEGTSLIEV LQNCPVFNDG VWNEVTDRKT MADRQLVLEH GKPLVYGKNK EFGIRMRKDF TPEVVEVGEG KVPESELVVH DETGSPAYTH MLALMNYPEF PIPVGVFRAE PRPSYDSMAV AQVKTAVESQ GPADLKALLY SGMTWEVSPD GIKH
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