| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0071 |
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| Symbol | |
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| ID | 8542441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 107795 |
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| End bp | 108859 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646384858 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding protein |
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| Protein accession | YP_003264605 |
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| Protein GI | 262193396 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.81164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTT CGACTTCCAA CAAATCCGGT AACGGCAAGC TCATCAAGCT CAGCAAGAAG
GACTTCGAGT CCGACCAGGA CGTCCGCTGG TGCCCGGGGT GTGGTGACTA CGCGATCCTC
GCCACCGTCC AGCGCGCCCT GGCCAACCTC AAGGTCGAGC GCGAGAACAC GGTGTTCGTC
TCGGGTATCG GCTGCTCCAG CCGCTTCCCG TACTACATGA ACACCTACGG GTTTCACAGC
ATCCACGGCC GCGCCCCGGC CATCGCCACC GGCCTCAAGG TCGCCCGCCC CGAGCTCTCG
GTGTGGGTGA TCACGGGCGA CGGCGACGGC CTCAGCATCG GTGGCAACCA CCTGATGCAC
GCCATGCGCC GCAACGTGAA CCTCAACATC ATCCTGTTCA ACAACCAGAT CTACGGGCTC
ACCAAAGGCC AGTACTCGCC CACCTCGCAG GTCGGCAAGA AGACGCCGAC CTCGCCGCTG
GGTTCGGTGG ATCTGCCGGT CAACCCGCTG GCGCTGGCCA CGGGCGCGGG CACGACCTTC
ATGGCCCGGG TCGGCGACAC CGACGCCAAG CTGTTCCTCA AGATCCTCGA GCGCGCCCAG
GCGCACGAGG GCACCTCGCT CATCGAGGTG CTGCAGAACT GCCCGGTGTT CAACGACGGC
GTGTGGAACG AGGTCACCGA CCGCAAGACC ATGGCCGACC GCCAGCTCGT GCTCGAGCAC
GGCAAGCCGC TGGTCTACGG TAAGAACAAG GAGTTCGGCA TCCGCATGCG CAAGGACTTC
ACCCCCGAGG TGGTCGAAGT CGGCGAGGGC AAGGTGCCCG AGAGCGAGCT GGTCGTGCAC
GACGAGACGG GCTCGCCCGC GTACACGCAC ATGCTGGCGC TCATGAACTA CCCCGAGTTC
CCGATCCCGG TCGGCGTGTT CCGCGCCGAG CCGCGGCCGT CGTACGACAG CATGGCGGTC
GCCCAGGTCA AGACCGCGGT CGAGAGCCAG GGCCCCGCCG ACCTCAAGGC GCTGCTGTAC
TCGGGCATGA CCTGGGAAGT CAGCCCCGAC GGCATCAAAC ACTGA
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| Protein sequence | MSASTSNKSG NGKLIKLSKK DFESDQDVRW CPGCGDYAIL ATVQRALANL KVERENTVFV
SGIGCSSRFP YYMNTYGFHS IHGRAPAIAT GLKVARPELS VWVITGDGDG LSIGGNHLMH
AMRRNVNLNI ILFNNQIYGL TKGQYSPTSQ VGKKTPTSPL GSVDLPVNPL ALATGAGTTF
MARVGDTDAK LFLKILERAQ AHEGTSLIEV LQNCPVFNDG VWNEVTDRKT MADRQLVLEH
GKPLVYGKNK EFGIRMRKDF TPEVVEVGEG KVPESELVVH DETGSPAYTH MLALMNYPEF
PIPVGVFRAE PRPSYDSMAV AQVKTAVESQ GPADLKALLY SGMTWEVSPD GIKH
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