| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0069 |
|---|
| Symbol | |
|---|
| ID | 8542439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 103817 |
|---|
| End bp | 105514 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646384856 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_003264603 |
|---|
| Protein GI | 262193394 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.242459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.667215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGT TCAGCAACGA CCCAGACCTC GCCGAGCAGC AGATGTGCGC CATCATCTTC
TACCTGACGG CGTTCGGCTA TATCGACGGC AACTTCGACC TCGCCGAGAA GACCTTCGTC
CGCGGCTACA TCCGCAAGCT GGTCGAGTAT CGCGCCCTCG ACGCCATGCC CGACGAGAAC
CAGGAGGTCC GCGACGAGAT CGTCGGCAAA TTCACCTCGC ACTTCCACGA GGTCTTTGAG
GCCATCAACC GCGAGATCCG CGCGCTGTTC ACCGAGGTCG TCGCCGACGA CGAGAAGGTC
GAGGAGTTCG TCTACGCGCG CCTCAAGCTG CGCAGCTACG AGGCCTTCAA GAGCTTCGAC
AAGGACAACC AGCAGGAGCT TCTGGCCACG GTCGACGAGC TGATCTACGC CGACGGCACC
ATCCACCCGG CCGAGGCCAG GTTCCGCGAG GAGATCCAGA ACCTGCTCAA GGTCGAGGTC
CCCGACCTGC CCGCCTCGGT GCCCGCGGGC GGCAAGAGCG CGGCGCTGCT CATCGACGAT
CCGGTGTATC TGCCGCCGAG CCGCGACGAT CATCCCTTCT TCTCCGAGAG CGAATACCAC
TACTCGGCCG ACCCGGTGCG CATCCGCAAG CAGGCCGACA ACGACCACAA CATCATCGTG
CGCACCATGG CGCTGCTCGA CGAGCAACGC GGCCGCGGCA AGGGCAAGCT CACGGGCGCG
CACTCGGTGA CCGAGTTCCA GGGCCAAGAT CCCTTCCTCG ATGGACACGT CTACGTCCAC
CCGGTCGAAG ACGGACAGTC GTACGAGCTC ACGGTGCTCG GCGATCTGCA CGGCTGCTAT
AGCTGCCTCA AGGGCGCGCT CATGCAGGCC GATTTCTTCG CCAAGGTCGA GGCCTACCGG
CTCGACCCCA AGCACAATCC CAACCCCAAG CTGGTGCTGC TCGGCGACTA CATCGACCGC
GGCCACTTCA GCTACCACGG CATCCTGCGC ACCGCGATGC AGCTCTTCAC CGCCATGCCC
GAGCACGTGT ACATGCTGCG CGGCAATCAC GAGTACTACA TCGAGTACGG CGGACGCGTG
TACGGCGGCG TCAAACCCGC CGAGGCCATC AACACGCTCA TCGGCTACAT GCCGAGCGAG
ATGTTCACCT CGTACATGAA CCTGTTCGAG GCGCTGCCCA ACGTGCTGCT CTTCGACCGC
ATGTTCTTCG TCCACGCCGG CATCCCGCGC GATTCGGCGA TCGAGGACAA GTACAAGGAC
CTGTCCAGCC TCAACGACAG CGACCTGCGC TTCCAGATGC TGTGGAGCGA TCCCAGCCAC
ACCGACTTCA TCCCGCGCGA GCTGCAGGAG CAGAACGCGC GCTTCCCCTT CGGCCGCACG
CAGTTCGAGA ACTTCATGGA CCGCGTCGGT TGCACGACCA TGATCCGCGG TCACGAAAAG
GTCGCCGAGG GCTTCCGCGC GGTCTACCCG GGCAACCGCG TCGCCCTGCT CAACCTGTTC
TCAGCCGGCG GCGCCGACAA CGACGACCTG CCCGCCGACT CGAGCTACCG CGAGGTCACG
CCCATGGCGC TCACCATCCG CATCGACGAC GGCAACACCA AGGTCACGCC CTGGGCCATC
GATTTCCGGC CCTTCAACGA CCCGCGGCGC AACGCCTTCT ACGCCTCGCG CCCCGAGATC
GAGCACAAGC AGGGCTGA
|
|---|
| Protein sequence | MLKFSNDPDL AEQQMCAIIF YLTAFGYIDG NFDLAEKTFV RGYIRKLVEY RALDAMPDEN
QEVRDEIVGK FTSHFHEVFE AINREIRALF TEVVADDEKV EEFVYARLKL RSYEAFKSFD
KDNQQELLAT VDELIYADGT IHPAEARFRE EIQNLLKVEV PDLPASVPAG GKSAALLIDD
PVYLPPSRDD HPFFSESEYH YSADPVRIRK QADNDHNIIV RTMALLDEQR GRGKGKLTGA
HSVTEFQGQD PFLDGHVYVH PVEDGQSYEL TVLGDLHGCY SCLKGALMQA DFFAKVEAYR
LDPKHNPNPK LVLLGDYIDR GHFSYHGILR TAMQLFTAMP EHVYMLRGNH EYYIEYGGRV
YGGVKPAEAI NTLIGYMPSE MFTSYMNLFE ALPNVLLFDR MFFVHAGIPR DSAIEDKYKD
LSSLNDSDLR FQMLWSDPSH TDFIPRELQE QNARFPFGRT QFENFMDRVG CTTMIRGHEK
VAEGFRAVYP GNRVALLNLF SAGGADNDDL PADSSYREVT PMALTIRIDD GNTKVTPWAI
DFRPFNDPRR NAFYASRPEI EHKQG
|
|---|
| |