| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0059 |
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| Symbol | |
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| ID | 8542429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 89421 |
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| End bp | 90782 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646384846 |
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| Product | 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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| Protein accession | YP_003264593 |
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| Protein GI | 262193384 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.17333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAG CCCCGGGCGG GACTCCGCCG GCGAAATCGG ACAACATGAC GAATTCGTCC
AGCGCGGAAT CTGTCCGGGC GAGCGAGCTG CGCGCCGAGG CCGCGCTGGC CCGGGCGCCG
CGCGCCGAAC GCGCGATCTT GGCCGCGTGC ATGGGCGATG GTTGCCCGAG CTGGCAGCAG
GCGGCCGAGC TGTTCGCGGT CCGCGACGCC GGGCTCGATG CCCTGGTCGC GGTCGCCGAC
GCCGTGCGCC AGCGCCAGGT CGGCGAGGCG GTGAGCTACG TCGTCAACCG CAACGTCAAC
TTCACCAACG TGTGCGTCAA GAAATGCCAG TTCTGCGCCT TCTCGCGCGA GCTGCGCTCG
GAGCAGGGCT ACTACCTCGC GCGCGACCAG GTCATCGCGC GCGTGCGCGA AGCCCACGCC
CTGGGCGCCA CTGAGGTGTG CCTGCAGGCC GGGCTGGCGC CCAGCGCCGA GGGCCGCCAG
TACATCGAGC TATGCCGGGC CGTGAAGCGG GCGGTGCCCG CGATCCACGT GCACGGCTTC
TCGCCCGAAG AGGTCCGCTA CGGCGCTCTG CGCGCACACA TGAGCGTGCG CGCGTATCTC
GAAGAGCTGC TCGACGCTGG GCTGGGCTCG ATGCCGGGCA CATCGGCCGA AATCCTCGAC
GACGAGCTGC GCGCGCGCAT CTCGCCCGGA CGCATCACCA CGGCGCAGTG GATCGATGTG
GTCACCACCG CGCACGCGCT GGGGATTCCG ACCACCTCGA CCATCATGTA CGGCCACGTC
GAAGACGCCG GCCACCGCGC CCGTCATCTG GCCCTGCTGC GCGATATTCA GGCCGATACC
GGCGGTTTCA CGGAATTCGT ACCGCTGTCC TTCATCCCCA CGCACGCGCC CATGTACGCG
CTGTCGACCG TGCCCGGTGT GCGCCCAGGG CCGCGGCCAG ACGACGTCGT GCGCATGCAC
GCGATCGCGC GTCTGATGCT CGGTGCCAGC GTGCGCAACA TCCAGGTCTC GTGGGTCAAA
GAGGGCATGG ACATGGCCGC GCGTCTGCTC GGCTGCGGCG GCAACGACCT CGGCGGCACG
CTGATCAACG AGAGCATCTC GACCGCGGCC GGCGCCGGCC ACGGTCAGCG CCAGAGCCCG
CGCGCGCTGC GCCAGTGCAT CCGGGCTGCC GGGCGCGTGC CCGTGCAGCG CGACACCGGC
TATCGCGTGC TGCGCCGCTT TGGCGACGCC GAGAGCGACG CCGAGAGCGG CGCGGACACG
CTCGACGCGG CCGGCGGCGA CGAGCGCTTT GGCTCGTTCG AGGCGCTCAT CGGCGATCGC
CGCCATCGCT ACCGCGGCAT CGGCGCGCCC GGCGGCGACT GA
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| Protein sequence | MSEAPGGTPP AKSDNMTNSS SAESVRASEL RAEAALARAP RAERAILAAC MGDGCPSWQQ
AAELFAVRDA GLDALVAVAD AVRQRQVGEA VSYVVNRNVN FTNVCVKKCQ FCAFSRELRS
EQGYYLARDQ VIARVREAHA LGATEVCLQA GLAPSAEGRQ YIELCRAVKR AVPAIHVHGF
SPEEVRYGAL RAHMSVRAYL EELLDAGLGS MPGTSAEILD DELRARISPG RITTAQWIDV
VTTAHALGIP TTSTIMYGHV EDAGHRARHL ALLRDIQADT GGFTEFVPLS FIPTHAPMYA
LSTVPGVRPG PRPDDVVRMH AIARLMLGAS VRNIQVSWVK EGMDMAARLL GCGGNDLGGT
LINESISTAA GAGHGQRQSP RALRQCIRAA GRVPVQRDTG YRVLRRFGDA ESDAESGADT
LDAAGGDERF GSFEALIGDR RHRYRGIGAP GGD
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