Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0058 |
Symbol | |
ID | 8542428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 88165 |
End bp | 89424 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646384845 |
Product | 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit |
Protein accession | YP_003264592 |
Protein GI | 262193383 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.161997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGCGG CCGGGCCCGG TGTCATCGCG CGCGCGGCCG AGCGCCCGCT GAGCGACGGC GAGCTGAGCG CGCTGGCCGA GCTCGACGCC GCCGCCCTCG AGCGCCGCAC CGGCGACCTG ATGCGCGCGG CCGCCGAGCG GCGCGATCGC GCCTGGGGCC GGGCGCTCAG CTTCTCGCCC AAAGTCTTTT TGCCGCTCAC CAACCTGTGT CGCGACGCCT GCGACTACTG CTCGTTCCGG CGCTCGCCCA AGCAGGCGGG CGCCTGGACC ATGACCCCGC GCGAGGTCGA CACCTGGCTG CGCCGCGGCC GCGCCCAGGG CTGCGTCGAG GCCCTGTTCT GCCTGGGTGA CACGCCCGAG AGCGCGTTCC CCTCGTACCG GGCCCAGCTC GCGGGCTGGG GCCACGAGAG CACGGTGGCC TATCTCGTGG CCGCCGGTGA GCGCGCGCTC GAGATGGGGC TTTTGCCGCA CACCAACGCC GGCGTGCTCG GCTGCACCGA GATCGCCCTG CTCAAGCGCG TCAACGCCAG CCAGGGGCTG ATGCTCGAGA GCGTGAGCCC GCGGCTGTGC GCGAAGGGCA TGCCCCACCA CCGGGCCCCG GACAAGCGTC CGGAAAAACG CCTGGCCATG CTCGAGAGCG CGGGCGCGCT GCGGGTGCCC TTCACCACCG GCATCCTGGT CGGCATCGGC GAGACCGAGC GCGAGCGCAT CGACTCGCTG GTGGCCATCC GCGACCTGCA CCGCCGCTTC GGCCACATTC AAGAGGTCAT CGTCCAGCCC TTCCGCGCGC GCCCGGCGGT GCCCATGGCG GCGGCGCCCG AGGCCGGCGA TCGCGAACTC CTGCGCGCGA TCGCGCTGGC GCGCCTGATC CTCGATGACG AGGTCGCGGT GCAGACCCCG CCCAACCTCG GCGCCTCGCA CACGGCCACC GCGGCCGAGG TGAGCGCCTT GCGCGGCGCC GGAATCAACG ACTTCGGCGG CATCTCGCCG GTCACGCCCG ACTACATCAG CCCCGGCCAT CCCTGGCCGC AGCTCGACGT CCTGGCCAGC GCCTGCGCCA GCGCGGGCGC GACCCTGGTC CCGCGCCTGC CGGTGTATCC GCGCTACCTC GAGGAGTCCG ATTTCATCAG CGGCGCGGTG CGCGCGCATC TGGCCGACGC GAGCGCGCGC CTGGCCACGA TGCGGATCAC CTTCGGAGTC GCGAGCCCGG ACCCGAGTCT GCCCGCCGAA GCGGGCGCCG AAGCGGGAGT GCGCCGGTGA
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Protein sequence | MSAAGPGVIA RAAERPLSDG ELSALAELDA AALERRTGDL MRAAAERRDR AWGRALSFSP KVFLPLTNLC RDACDYCSFR RSPKQAGAWT MTPREVDTWL RRGRAQGCVE ALFCLGDTPE SAFPSYRAQL AGWGHESTVA YLVAAGERAL EMGLLPHTNA GVLGCTEIAL LKRVNASQGL MLESVSPRLC AKGMPHHRAP DKRPEKRLAM LESAGALRVP FTTGILVGIG ETERERIDSL VAIRDLHRRF GHIQEVIVQP FRARPAVPMA AAPEAGDREL LRAIALARLI LDDEVAVQTP PNLGASHTAT AAEVSALRGA GINDFGGISP VTPDYISPGH PWPQLDVLAS ACASAGATLV PRLPVYPRYL EESDFISGAV RAHLADASAR LATMRITFGV ASPDPSLPAE AGAEAGVRR
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