| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0029 |
|---|
| Symbol | |
|---|
| ID | 8542399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 41687 |
|---|
| End bp | 42781 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646384817 |
|---|
| Product | cobalamin synthesis protein P47K |
|---|
| Protein accession | YP_003264564 |
|---|
| Protein GI | 262193355 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.341587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCCC CGACCCCCAC GCCGCAGGTT CCCGTCATCG TGCTCACCGG TTTCCTCGGC
AGCGGCAAGA CCACGCTGCT CAACCGGCTG ATGCGGACGC GGCCGCTGGG GCGCGGCAAG
CTGGCCATCG TGGTCAACGA GTTCGGCGAG GTCGGTATCG ACGGCGAGCT GCTGCCCTCG
GACATGACCC GACAGGTCGA GCTGCCCGGC GGCTGTATCT GCTGCCTGCT CAACGACGAC
CTGGACACCA CGCTGCTCGA GATCCTCGAC AGCAACGAGG CGCTCGACGC CATCATCATC
GAGACCACGG GCATCGCCGA GCCCATGCCC ATCTGCTGGG CGCTCGAGCG CGAGCCGCTG
AGCGAACGGG TGCGCCTGGC CGCGGTCATC ACCGTGGTCG ACGCGGTCAA TTTCGAGACC
AGCCGCGCCG ACAACCCGAG CGTGGACGCG CAGGTCGAGT ACGCCGACAT CCTGGTGCTC
AGCAAGCTCG ATGAGCTCGG CATCAGCGAG CCGCCCGCGG CCCTGGTGAG CGCGCTGCGC
GAGGAGAACC CCAACGCCAC GCTGCTCGCG GGCACGCCCG AGGAGGTGAG CGCGTCGCTG
TGGCGCTCGC TCGCCGATCC CGAGCAGTCT CTGCGCCGCG CCGGCGAGCC CAGCCGGGCC
CACGAGCACG AGCACGAGCA CGGCAACGGT CACGGGCACA GCAACGGGCA CGAGCACGGC
GATAGGGTCG CGGCTTCGGC GGCCGCGCAC GGCTTCGACA CCTTGTGGCT GCCGATCGAG
GCCACCTTGG ATTTCGAGGA GTTGGCCTCG CAGCTCGAGG AGCTGCCGGG CAACTGGGTC
CGCATCAAAG GTATCGCCCA CGCGGCCGAC GGCAGCACGG GCGACAGCAC CCCGCGCTGG
ATCGCGTTTC ACCGGGTCGG CACCCGGGTC TCGTGGGAAC CACTGGCGGC GGCCTCATCG
CCGCAGCCGC GCATCGTCGC GCTGGGCCGA GAACTCGATC GCTCACGTCT GGCTGCATGC
CTCGATGCCG CCGTGCTAGT CTCGGAGCGA TCTGGGGGCT CGCGGTCACC GTTCCGTGGA
ACCGAAGAGG AATGA
|
|---|
| Protein sequence | MSSPTPTPQV PVIVLTGFLG SGKTTLLNRL MRTRPLGRGK LAIVVNEFGE VGIDGELLPS
DMTRQVELPG GCICCLLNDD LDTTLLEILD SNEALDAIII ETTGIAEPMP ICWALEREPL
SERVRLAAVI TVVDAVNFET SRADNPSVDA QVEYADILVL SKLDELGISE PPAALVSALR
EENPNATLLA GTPEEVSASL WRSLADPEQS LRRAGEPSRA HEHEHEHGNG HGHSNGHEHG
DRVAASAAAH GFDTLWLPIE ATLDFEELAS QLEELPGNWV RIKGIAHAAD GSTGDSTPRW
IAFHRVGTRV SWEPLAAASS PQPRIVALGR ELDRSRLAAC LDAAVLVSER SGGSRSPFRG
TEEE
|
|---|
| |