| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0025 |
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| Symbol | |
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| ID | 8542395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 35385 |
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| End bp | 37943 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646384813 |
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| Product | UvrD/Rep helicase family protein |
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| Protein accession | YP_003264560 |
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| Protein GI | 262193351 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGC CAGTGCAGCC ATCGACGCCA GGTGCCGAGA TCGTCGCCGA GGAAGAGCGT
CTCCACGGCC GCGTGCAAGC GCGCGTGGCC ATGGGTCAAG AGGACATCGT CGACCGGGTC
GGCACCGACG AATTCGACGA GGAGCTGATC CGCCTGCGCG ACATGATCGC CGAGGCCAAG
CCCGAGGATC TGCCGCCCCT GGTCGAGCAG ATGACGCGTC TGGCCGCCAT CCGCAGCCGA
TTGGGCGGCT CGCGCAGCCT GCCGGCGGAT CCCGCCTCGC CGTACTTCGC GCACATGGTG
CTGAGCGAAA ACGGCCGCCG TCGCGACGTG CTGGTGGGCA AGCGCGGCTT CATCGACCGC
AAGCACAACG TCCAGATCGT CGACTGGCGC AACGCGCCGG TGTCGCGCAT CTACTACCGC
TACGACGAGG GCGACGACTA CGAGGAGGAG ATCGCCGGGC GCCCCACCCA GGGCATGGTC
GAGGTGCGCC GCAACGTCTC CATCATCCAC AGCAAGCTGC GCCGCATCGG CGCGCCCCAG
GGCACCTTCG TCCGCGATAG CCACGAGGTC TGGCACGAGG CCGTGGGCGA GGCCATGCCG
GTGCTGCGCG GCGGCCAGGG CAAGGCCGTG CGCGTGCCCC GCGCGCTCAA GCCCGAGAGC
CGCGACGCCC AGGACGACAA GGGCGGCAGA GGCAAAGGTA AGGGCCGAGG CAAAGGCGGG
CGCGGACAGC CGCGCGCCGC GCAGCGCGCC ACGCTCGGCG TCCACGGCGA TGACCTGCAC
CGCGCGGACA AGTCGCTGCC CGAAATCGCA GCCCTGATCG ACGGCGAGCA GTTCGACCTC
ATCACCCAGC CCGAGAGCGG CATGGTGGTC ATCCAGGGCG GCGCCGGCTC GGGCAAGACC
ACGGTCGCCC TGCACCGCAT CGCCTACCTC AACTTCGCCG ATCGCTCGCG CTTCCGGCCG
CAGAACATCC TGTTCGTGGT GCCCTCGGCG TCGCTGGCCA GGTACGTGGC CGGCGTGCTG
CCCGCGCTGG GCGTGAGCGG GGTCGCCGCG CTCACCTACG AGCGCTGGGC CCGCGATCTG
CGCATCCGCC TGCTGCGCGG CAGCAGCGGC AAGTACAACC ACGACACGCC CGAGGCGGTG
TCGCGGGTCA AGAAGCATCC CGCTCTGCTG GGCGTGCTCG ACCGCTACGT CGCCGCCCAG
GCCGCGAGCT TTGGCGACGA GATCCTCGCA GCCGCGCGCG AGGCCGGCGA CCGGCGCGCC
GCCGAGATCC TCCAGCAGGC CTGGGCCGAG CGCGCCGAGC TGCCGCTGGC CGTGCGCCTG
GCCAAGCTCG GCGGCTGGCT GCGCTCGCGC GACGCGCGCC TGCCGTCGCC GGTGCGCCAG
GCGGCCGAGA GCGCGGTCAA GCGTCTGCGC CGCCGCGCCG GCGACGTGCT CGCCGACTGG
TCCGAGCTGA TGAGCGACCC GCGCGCGCTG GGCGAGGGCT TTGCCGGCTG GGACGACCTG
AGCGCGGCCG ACCTGCGGCG CACGGTCGAG TGGTGCGCGC AGCAAGCGGC CGGGCCGGTG
GAGCTGGCCG TCAACCCCGA TGGTCAGCCC ATCGACGCCA TCGACGGCCG CGCCATCGAG
GAGGACGGCC CCGGCGGACG CTTCGACCTC GAGGACGATC CCATCCTGCT GCGGCTCATC
CAGCTCAAGC GCGGCCGCCT GCTCGGCGCC GGCGGGGCCG AGGTGAGCTA CGAGCACGTG
GCCATCGACG AGGCCCAGGA CCGCTCGGCC ATCGAGGTCA AAGTCCTCAT CGAAGCCACG
CGCGCGCACG AGGACTCCCG CGGCCGCCCC CAGCGCTCGA TCACCATCGC CGGCGACACC
GCCCAGCGCC TCGTGTTCGA CAACAGCTTC CACGGCTGGC AGTCGCTGCT CGACAACACC
GGCCAGGCCG CCGTGGTCCG CCCGCTGCGG CTCTCGTATC GCTCCACGGC CGAGGTCATG
TACTTCGCGC GCGAGGTGCT CGGCCCCGAG CTGGCACCCG ACGAGCCGCT GGTCGCGCGC
TCGGGCGAGC CGGTCGAGCT GCACATGTTC GGCGACATCG GCGAGGCCGT GGCGTTCCTC
GCCGACGCCT TGCGTGCGCT GGTCGGCCGC GAGCCGAGCG CGTCCGTCGC CGTGCTGGCG
CGCCACTCCG AGCAGGCCGA CGCCTACTAC GCCGGCCTGA TGCGCGCCGA GGTGCCGTCG
CTGCGCCGGG TGCGCAACCA CGACTTCCGC TTCGTGCCCG GCGTCGACGT CACCGACGTC
ACCCAGGTCA AAGGTCTCGA GTTCGACTAC GTGATCATGG TCGACGTGAA CGCCAGCAGC
TACCCGAGCA ACGTCGAGTC GCGCCACCTG CTGCACATCG GCGCCACCCG CGCCGCGCAT
CAGCTCTGGC TGATCTCGAC CAGCACGCCC TCGAACCTGC TTCCCGAGGA GCTGCGCGAG
CGCGGCAGCC TGGGCGCGCC GCCCCCGGCC GACGCCGATG ACAACGACGG CGGCGGCACC
GGCGACGAAG CCGACGCCGA GACGGCCGCG AGCAGCTAG
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| Protein sequence | MSKPVQPSTP GAEIVAEEER LHGRVQARVA MGQEDIVDRV GTDEFDEELI RLRDMIAEAK
PEDLPPLVEQ MTRLAAIRSR LGGSRSLPAD PASPYFAHMV LSENGRRRDV LVGKRGFIDR
KHNVQIVDWR NAPVSRIYYR YDEGDDYEEE IAGRPTQGMV EVRRNVSIIH SKLRRIGAPQ
GTFVRDSHEV WHEAVGEAMP VLRGGQGKAV RVPRALKPES RDAQDDKGGR GKGKGRGKGG
RGQPRAAQRA TLGVHGDDLH RADKSLPEIA ALIDGEQFDL ITQPESGMVV IQGGAGSGKT
TVALHRIAYL NFADRSRFRP QNILFVVPSA SLARYVAGVL PALGVSGVAA LTYERWARDL
RIRLLRGSSG KYNHDTPEAV SRVKKHPALL GVLDRYVAAQ AASFGDEILA AAREAGDRRA
AEILQQAWAE RAELPLAVRL AKLGGWLRSR DARLPSPVRQ AAESAVKRLR RRAGDVLADW
SELMSDPRAL GEGFAGWDDL SAADLRRTVE WCAQQAAGPV ELAVNPDGQP IDAIDGRAIE
EDGPGGRFDL EDDPILLRLI QLKRGRLLGA GGAEVSYEHV AIDEAQDRSA IEVKVLIEAT
RAHEDSRGRP QRSITIAGDT AQRLVFDNSF HGWQSLLDNT GQAAVVRPLR LSYRSTAEVM
YFAREVLGPE LAPDEPLVAR SGEPVELHMF GDIGEAVAFL ADALRALVGR EPSASVAVLA
RHSEQADAYY AGLMRAEVPS LRRVRNHDFR FVPGVDVTDV TQVKGLEFDY VIMVDVNASS
YPSNVESRHL LHIGATRAAH QLWLISTSTP SNLLPEELRE RGSLGAPPPA DADDNDGGGT
GDEADAETAA SS
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