| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0013 |
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| Symbol | |
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| ID | 8542383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 15541 |
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| End bp | 17559 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646384801 |
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| Product | excinuclease ABC, B subunit |
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| Protein accession | YP_003264548 |
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| Protein GI | 262193339 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACC GACTCTTTGA AATCGTTTCG CCGTTCACAC CTACCGGGGA CCAACCCGAG
GCCATTCGCC AGCTCATCGA GGGACTCGGG CGCGGCGACC GGCACCAGGT CCTGCTCGGC
ATCACCGGCT CGGGCAAGAC CTTCTCGGTC GCCAACGTCA TCGCCGAGAC CGGTCGCCCC
GCGCTGATCA TCGCGCCCAA CAAGATCTTG GCAGCGCAGC TCTACGGCGA GTTCAAAGAG
CTGTTTCCCA AACACGCCGT TCACTACTTC GTCAGTTACT ACGACTACTA CCAGCCAGAA
GCCTACGTCC CGACGACCGA TACATACATC GAGAAAGACT CCCTCATCAA CGAGGAGATC
GATCGCATGC GGCACGCGGC CACCTACGCG CTGCTGTCGC GCCAGGATGT CATCATCGTG
GCCTCGGTGT CGTGCATCTA CGGTATCGGC GCGCGCGAGA TGTACGCGTC GATGACCTGC
GACATCGAGT CCGGTACCGA GGTCGCGCGC GACGATGTCT TGCGCCGTCT GGTCGAGTTG
CAGTACGAGC GCAACGACGT CGACTTCCAC CGCGGCACCT TTCGCGTGCG CGGCGACGTG
GTCGAGGTAT TCCCGGCCTA CGAGGCCGAT ACCGCCATCC GCATCGAGTG GTGGGGCGAC
GACGTCGAAT CCATCTCCGA GATCGACCCG CTGCGCGGCA AGGTCAAGCG CTCGCTCGGA
CACGTGTCGA TCTTCCCGGC CTCGCACTTC GTCACGCCCA GCGACCAGCT CCGGCGCGCG
ATCGAGGGCA TCCGCGTGGA GCTGCGCGAG CGGCTCGAGG AGCTGTCGCA GCAGAACAAG
CTGGTCGAGC GCCAGCGGCT CGAGCAGCGC ACCATGTACG ATCTCGAGTG TCTCGAGCAG
ATGGGATTTT GCTCCGGTAT CGAAAACTAT TCGCGCCACC TCACCGGACG CGATTCCGGC
CTGCCGCCGC CCACGCTCAT CGACTACTTC CCCGAGGAGT TCATCCTCTT CATCGACGAA
TCGCACCAGA CCGTGCCGCA GCTCCAGGCC ATGTACCGGG GCGATCGCTC GCGCAAGCAG
ACCCTGGTCG ACTTCGGCTT CCGGCTGCCC AGCGCCATCG ACAACCGGCC GCTGCGCTTC
GATGAATTCA ACGAGCGCGC GCGCCAGTAT ATCTATATCT CGGCGACGCC GGCCGACTAC
GAACTCGAGC AGTCGCAGGG CGTCATCGTC GAGCAGATCA TCCGCCCGAC CGGTCTGCTC
GACCCCGAGA TCGAGGTCCG CCCGGTCGGC GAGCAAGTCG ATGACCTGTT GTCCGAAATC
CGTCTGCGCA TCGAGCGGCG CGAGCGCGTG CTGGTCACCA CGCTGACCAA ACGCATGGCC
GAGGACCTCA CCGAGTACTA CGCCGACCTC GACGTGAAAG TGCGCTACCT GCACTCCGAT
GTCGACACCC TCGAGCGCAT CGAGATCATC CGCGACCTGC GCCGCGGCGT GTTCGACGTG
CTGGTCGGAA TCAACCTCCT GCGCGAGGGC CTCGACATCC CCGAGGTGTC GCTGGTCGCC
ATTCTCGACG CCGACAAAGA GGGCTTCCTG CGTTCGACCC GCTCGCTCAT CCAGACCATC
GGACGCGCGG CCCGAAACGT CAACGGCAGG GTGCTGCTGT ACGCCGACCG CATCACCAAG
TCGATGCGCG ACGCCATCGA CGAGACCGAG CGTCGCCGCG CGCTGCAGGG CGAGTACAAC
CAGACCCACG GCATCGTGCC GCGCTCGACC ACGCGCGCCA TCCTCGATAT TCAGCCGACC
AACGCAGACG GCAGCCTCAC GCGCGCGCCG CTCACCGAGG CGGTGCCCAC CGATGTTCTC
GACGAGCTGT CCGTCGACAA CGCCGCCGAG CTGCGCAAGG CCATCGAGAA GCTGCGCGGC
GAGATGCGCG CGGCCGCGGC CGAGCTGGAT TTCGAACGCG CGGCCAAGCT CCGCGATCGC
GCGCGCGAGC TCGAATCTCT CGAGCTCGCC GTCGGCTGA
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| Protein sequence | MEDRLFEIVS PFTPTGDQPE AIRQLIEGLG RGDRHQVLLG ITGSGKTFSV ANVIAETGRP
ALIIAPNKIL AAQLYGEFKE LFPKHAVHYF VSYYDYYQPE AYVPTTDTYI EKDSLINEEI
DRMRHAATYA LLSRQDVIIV ASVSCIYGIG AREMYASMTC DIESGTEVAR DDVLRRLVEL
QYERNDVDFH RGTFRVRGDV VEVFPAYEAD TAIRIEWWGD DVESISEIDP LRGKVKRSLG
HVSIFPASHF VTPSDQLRRA IEGIRVELRE RLEELSQQNK LVERQRLEQR TMYDLECLEQ
MGFCSGIENY SRHLTGRDSG LPPPTLIDYF PEEFILFIDE SHQTVPQLQA MYRGDRSRKQ
TLVDFGFRLP SAIDNRPLRF DEFNERARQY IYISATPADY ELEQSQGVIV EQIIRPTGLL
DPEIEVRPVG EQVDDLLSEI RLRIERRERV LVTTLTKRMA EDLTEYYADL DVKVRYLHSD
VDTLERIEII RDLRRGVFDV LVGINLLREG LDIPEVSLVA ILDADKEGFL RSTRSLIQTI
GRAARNVNGR VLLYADRITK SMRDAIDETE RRRALQGEYN QTHGIVPRST TRAILDIQPT
NADGSLTRAP LTEAVPTDVL DELSVDNAAE LRKAIEKLRG EMRAAAAELD FERAAKLRDR
ARELESLELA VG
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