| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0004 |
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| Symbol | |
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| ID | 8542374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4639 |
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| End bp | 7104 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646384792 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_003264539 |
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| Protein GI | 262193330 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC CTACAGTCAC ACCAGCAAAC GACGCGACCG AATACGATGC TGACAGCATC
ACGGTTCTCA AAGGTCTCGA AGCCGTGCGC AAGCGCCCGG GCATGTACAT CGGCGACACC
GATGACGGCT CGGGCCTGCA CCACATGGTC CACGAGGTCG TGGACAACGC GGTAGACGAG
GCCCTCGCCG GCTACTGCGA CCGCGTCGAC ATCACGATTC ACTCCGACAA CTCGATCACG
GTCGAGGACA ACGGCCGCGG CATCCCGGTG GCCGTGCACA AGGACGAGGG TCGACCGGCG
GCCGAGCTGG TCATGACCGT CCTGCACGCC GGCGGCAAGT TCAACCAGAA CTCGTACAAG
GTCTCCGGTG GTCTGCACGG CGTCGGCGTC TCGGTGGTCA ACGCGCTGAG CCGGACGCTC
AAGCTCGAGA TCCGGCGCGA GGGCAAGGTG TATTTCCAGG AGTACCGCCA GGGCATCCCG
GTCAGCGACC TGCGCAGCAC CGGCACCACC GACCGCCGCG GCACCAAGAT CACCTTCCTG
CCCGACCCCG AGGTCTTCAA GCAGACCGAG TTCTCGTTCG GCGCGCTGTC GCAGCGCTTC
CGCGAGCTGT CGTATCTCAA CAGCGGCCTC ACCATCGCCA TCACCGACGA GCGCGAGAGC
CAGCAGCAGG TGTTCTGCTA CGAGGGCGGC ATGGCCTCGT TCGTGGCCGA CCTCAACGCC
AACAAGAACC CGGTCACCGA GGTGGTCGCG TTCACCGACG AGCGCGAGGG CGTCACGGTC
GACATCGCGA TGCAGTGGAA CGACTCGTAC GCCGAGCAGA TCAACTGCTT CACCAACACC
ATCAAGAACA AAGACGGCGG CACCCACCTC ACCGGCTTCC GCCAGGGTCT CACCCGCACG
GTCAACGCCT ATGCGGCCGA GAACAAGCTG CTCAAAGAGC TCAAGGGCAA CAACCTCTCG
GGCGAGGATC TGCGCGAGGG CCTGGTCGCC GTCATCTCGG TGAAGGTGGC CGACCCCAAG
TTCTCCAACC AGCCCAAGGA CAAGCTGGTG TCGTCCGAGG TCGCGGGCGC GGTCGCGGCC
GTGGTCAACG ACAAGCTGCA GAGCTTCTTC GAGCACAATC CCAAAGACGC GCGCTCGATC
ATCCAGAAAG CCGTGGTCGC CGCTCGCGCC CGCGACGCCG CCCGCAAGGC GCGCGAGATG
GTGCAGCGCA AAGGCGCGCT CGAGTACACC TCGCTGCCGG GCAAGCTGGC CGACTGCCAG
GAGCGCGATC CCAGCAAGTG CGAGCTGTTC ATCGTCGAGG GTGAGTCCGC CGGTGGCTCG
GCCAAGCAGG GCCGCGATCG CGAATTTCAG GCGATTCTGC CGCTCAAGGG CAAGATCCTC
AACGTCGAGC GCGCGCGCAT GGACAAGATG CTGTCCTCGC AGGAGATCGT CACGCTGATC
ACGGCGCTGG GCTGCGGCAT CGGCCCCGAG AAGGACATGG GCCGGCTGCG CTACCACCGC
ATCGTCATCA TGACTGACGC CGATGTCGAC GGTTCGCACA TCCGCACCCT GCTCTTGACC
TTCTTCTTCC GGCAGTACCC GGAGATCATC GAGAACAACC ACCTGTACAT CGCGCAGCCG
CCGCTGTTCA AAGTGAAGCG CGGCAAGTCC GAGACCTACC TCAAGAACGA GCACTCGCTC
GAGGACTACG TTCTCGACCT GGTGTCCAAA GAACTGGTCG TGCGCGGCAC TAGTGGCGAT
GGCGCCGGCG GCGATGACGC CGGGCCCGAG ATCACGGGTG AGGCGCTGCA CGCCTTCATC
AAGGACACCA ACGAGTACCG GCGCCACTAC ACGCAGCTCG ACAAGCGCGG TGACAGTCGC
CTGTTCGCCT CGTTCATCGA GGGCGGCGAG TTCACCGAGC AAGACCTCGC CAGCGAAGAG
GGCGTGGAGC GCGTCCGCGC CGGCATGCGC GCCTACCTCG AGGCCCACCA CAAGGACCTG
GCCGACCTCG AGTTCGAGCT GGTGCGCGAC GAAGAGCACA GCGTGTACGC GCTGCGAGCG
CCGCTCGAGG GCGGCAACGT CCGCCGCGAC ACCATCATCG GCCGCGACCT CTTGCAGACC
CGCGAGGTCG AGGAGATCGC GCGCTTGACC AAGAGCCTCG ACGCCACGCT GCGCGGCCCC
TACGTGCTGG TGCACAAGGG CGAGGACATC GGCACGGTGA CGACCCTCGA CGAGCTCGCC
GAGGCGGTCG AAGCCGTCGG CCGTAAAGGA CTCTCGATCC AGCGCTACAA AGGTCTCGGC
GAGATGAACT CCGACCAGCT CTGGGACACC ACCATGTGCC CGGATCAGCG CACCCTGCTC
CAGGTGCGCA TCGACGCCCG CGAAGAAGCT GCCGACGTGT TCTCCGTGCT CATGGGAGAC
CTCGTGGAAC CGCGCCGACA CTTCATCGAG AACAACGCGC TCAACGTCCG CAATCTCGAC
ATCTGA
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| Protein sequence | MADPTVTPAN DATEYDADSI TVLKGLEAVR KRPGMYIGDT DDGSGLHHMV HEVVDNAVDE
ALAGYCDRVD ITIHSDNSIT VEDNGRGIPV AVHKDEGRPA AELVMTVLHA GGKFNQNSYK
VSGGLHGVGV SVVNALSRTL KLEIRREGKV YFQEYRQGIP VSDLRSTGTT DRRGTKITFL
PDPEVFKQTE FSFGALSQRF RELSYLNSGL TIAITDERES QQQVFCYEGG MASFVADLNA
NKNPVTEVVA FTDEREGVTV DIAMQWNDSY AEQINCFTNT IKNKDGGTHL TGFRQGLTRT
VNAYAAENKL LKELKGNNLS GEDLREGLVA VISVKVADPK FSNQPKDKLV SSEVAGAVAA
VVNDKLQSFF EHNPKDARSI IQKAVVAARA RDAARKAREM VQRKGALEYT SLPGKLADCQ
ERDPSKCELF IVEGESAGGS AKQGRDREFQ AILPLKGKIL NVERARMDKM LSSQEIVTLI
TALGCGIGPE KDMGRLRYHR IVIMTDADVD GSHIRTLLLT FFFRQYPEII ENNHLYIAQP
PLFKVKRGKS ETYLKNEHSL EDYVLDLVSK ELVVRGTSGD GAGGDDAGPE ITGEALHAFI
KDTNEYRRHY TQLDKRGDSR LFASFIEGGE FTEQDLASEE GVERVRAGMR AYLEAHHKDL
ADLEFELVRD EEHSVYALRA PLEGGNVRRD TIIGRDLLQT REVEEIARLT KSLDATLRGP
YVLVHKGEDI GTVTTLDELA EAVEAVGRKG LSIQRYKGLG EMNSDQLWDT TMCPDQRTLL
QVRIDAREEA ADVFSVLMGD LVEPRRHFIE NNALNVRNLD I
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