| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2411 |
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| Symbol | |
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| ID | 8535575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2580078 |
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| End bp | 2581790 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646384785 |
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| Product | membrane protein insertase, YidC/Oxa1 family domain containing |
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| Protein accession | YP_003264267 |
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| Protein GI | 261856984 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.705473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATC GCCGCCTAAT TCTGGTTGTT GCTCTTGGTT TTGTTTTGAT ATCGCTCTGG
CAAGCCTGGA CGCATGACCA ATCGCAATCA GCCCAACAGA CGGCGGCCAC CCTGCAAAAC
GCGGCTAGTC CAGATAGTCC GGCACAACCC ACAGCAGCCA AAGACATACC GGCAACCTCA
GCGCCCTCTG CCAGTGGCCA GGACCAAAGC GCCGTACCCG GTGGCTCGGC AGCCAAACCG
ACTTCTAAAG CCGCGCAAAC CATTACTGTC AAAACAGATG TACTGGCTCT GAAAATCAGC
CTGCAAGGCG GGGTGATCGA TGAAGCCGAT CTGCTCAAAT ATCCTCAAGA ACAGGACAAG
GCCGACCCCG TTCGATTGCT GACGGACAGT AACGGCTTCG TTTATGTCGC GCAATCGGGC
TTGATCGGAG AGAAAGGCGC ACCGGCGCCG GACCACTACG CCCAATACAC TGCCCCGCAA
ATGGAATACA CGCTGACGCC AGGTGAAAAT GAGTTACGCA TTCCACTTAC CTGGGAAAAG
GACGGCATCA AGATCACCAA GTTGATCATC ATAAAACGTG GTGATTACAC CGTTCAGGTC
GAATACAAGA TCGACAACAC CAGCCAATCC CCCTGGGCGG CCAGCCAATA TCGTCAATTG
ACGCGGCTGG GTACCACGCC GGGCACGCAG CTGGTTCACA CCTATACCGG CACGGTTTAC
GCGGGTGATG TACCCGGCAC GAAAGATCGT TTGGCCTATG AAAAGATTCC GTTCGAGGAA
ATGCTGAAAA CCAAGCTTTC GAAGGATTTG AGCAGTGGCT GGGTGGCTAT TATCCAACAC
TACTTCATGA GTGCCTGGGT ACCGAGCGAT CGCCAACAGG TCAACCATTT CTACACGCTC
GTGTCGGACA AGAACAATCA GACCCTGTAC ACCATCGGCA TGAGTTCCCC GGTCACGACT
ATTCCGGCTG GGGGCTCGGG TGAATTGTCA TCCACGCTTT ATGTCGGTCC GAAAATCCAG
GCCAATCTTG CGCCGCTCGC ACAAGGCCTG AACCTTACTA TCGATTTCGG TATTTTCACC
GTCATCGCCG ATCCGATCTT CTGGCTGCTC AAGCACTTCC ATGAATGGGT TGGCAACTGG
GGCTGGTCGA TCGTGCTGGT GACGCTGGTC ATTAAACTCT TCTTCCTCTG GCCTTCGGCC
ATCAGTTATC GCTCCATGGC GAAAATGCGT GCCGTCACAC CGAAGATGAA GGCGCTCAAG
GAAAAATTCG GCGAGGACAG ACAAAAGCTT TCCCAGGAAA TGATGAAGCT TTACCAGCGG
GAGAAAATTA ATCCCTTGGG TGGCTGTCTG CCCATTGTGA TTCAAATTCC GGTCTTTATT
TCTCTGTATT GGGTATTGGC CGAATCGGTT GAATTGCGCC AAGCGCCGTG GATTTTGTGG
ATCCATGACC TGTCGCAGAA GGATCCGTAT TTCGTGCTGC CGTTGCTCAT GGGTATTTCC
ATGTTCATCC AGCAGAAACT CAACCCGGCG CCGGTTGACC CAATGCAACA GAAAATCTTT
GCCTGGTTGC CGGTCATCTT TACCATCTTC TTCTCGTTCT TCCCGGCAGG TTTGGTTCTG
TACTGGTTCG TGAACAATCT GCTCTCCATT GCGCAGCAGT ACATGATCAC GCGGAAAATC
GAGAAGCAGA TGGCACTGAT CAAGTCCGAG TAA
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| Protein sequence | MDNRRLILVV ALGFVLISLW QAWTHDQSQS AQQTAATLQN AASPDSPAQP TAAKDIPATS
APSASGQDQS AVPGGSAAKP TSKAAQTITV KTDVLALKIS LQGGVIDEAD LLKYPQEQDK
ADPVRLLTDS NGFVYVAQSG LIGEKGAPAP DHYAQYTAPQ MEYTLTPGEN ELRIPLTWEK
DGIKITKLII IKRGDYTVQV EYKIDNTSQS PWAASQYRQL TRLGTTPGTQ LVHTYTGTVY
AGDVPGTKDR LAYEKIPFEE MLKTKLSKDL SSGWVAIIQH YFMSAWVPSD RQQVNHFYTL
VSDKNNQTLY TIGMSSPVTT IPAGGSGELS STLYVGPKIQ ANLAPLAQGL NLTIDFGIFT
VIADPIFWLL KHFHEWVGNW GWSIVLVTLV IKLFFLWPSA ISYRSMAKMR AVTPKMKALK
EKFGEDRQKL SQEMMKLYQR EKINPLGGCL PIVIQIPVFI SLYWVLAESV ELRQAPWILW
IHDLSQKDPY FVLPLLMGIS MFIQQKLNPA PVDPMQQKIF AWLPVIFTIF FSFFPAGLVL
YWFVNNLLSI AQQYMITRKI EKQMALIKSE
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