| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2402 |
|---|
| Symbol | |
|---|
| ID | 8535566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2571391 |
|---|
| End bp | 2572311 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646384776 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_003264258 |
|---|
| Protein GI | 261856975 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTAC GTACCCAAAC CCTCATGCTA ATGCAGGTGA TCCCCTGGCG TAGCTATGTG
AAACTCTGCA AGATCAAAGT CGTCTCGCTG GTGGTTTTTA CCGCGCTGGT CGCCATGGTG
CTCGCTGCCC CACCGGGTAA TCTGCCTTGG GCCACGGTAC TGGCTGCGAC AGTAGGCATT
GCGCTCGCCG GTGCGTCGGC GGCCGCGTTA AACCACATCG CGGACCGGGA AATCGATACG
GTAATGGGCC GCACCCAGAA TCGTCCGCTA CCCATGGGAA ATATCTCGAG GGGATCCGCC
ACCGTATTTG CCTTATCGCT AGCCTCCCTC GCCCTCGTGA TCATCTGGAC CTTGGTCAAT
CCGCTGACGG CCGTACTGAC ACTCCTGACA CTGATCGGCT ACGCCGTGAT CTACACGCGC
TATCTCAAAT GGATCGGGCC ACAGAACATC GTCCTAGGCG GCGCTTCTGG CGCGGCGCCG
GCCATGCTGG GTTGGTGCGC CATCACCGGT CAGATTGGCT GGGAGGCATT TGCCTTGTTT
CTGATCATAT TTGTCTGGAC ACCACCCCAC TTTTGGGCGC TTGCCATTGC ACGGCGAGAC
GAATATGCCA AAGCAGGGGT ACCCATGATG CCGGTGATAC GAGGGGTGGC CTATACCAAA
CGCAGTATTT TCGCCTATGC CCTGGTTCTT ATCCCGGTGA GTTACTTGCC GGTTACCGTC
GGCTTGAGTG GACCTTTCTA CCTGATCGGC GCGACCGTGC TCGGCGGTTT GTTCGCCATT
CGTGCCTATC GATTGATGTT TGTTGACAGT GATCGTCAGG CGATGCGTCT ATTCGGTTTT
TCAATCACCT ACCTTACGGT CCTGTTTGCC TTATTACTGG TCGATCACTA CCTGCCGATC
AGCGGCTGGT CCTCCTGGTA A
|
|---|
| Protein sequence | MTVRTQTLML MQVIPWRSYV KLCKIKVVSL VVFTALVAMV LAAPPGNLPW ATVLAATVGI
ALAGASAAAL NHIADREIDT VMGRTQNRPL PMGNISRGSA TVFALSLASL ALVIIWTLVN
PLTAVLTLLT LIGYAVIYTR YLKWIGPQNI VLGGASGAAP AMLGWCAITG QIGWEAFALF
LIIFVWTPPH FWALAIARRD EYAKAGVPMM PVIRGVAYTK RSIFAYALVL IPVSYLPVTV
GLSGPFYLIG ATVLGGLFAI RAYRLMFVDS DRQAMRLFGF SITYLTVLFA LLLVDHYLPI
SGWSSW
|
|---|
| |