Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2380 |
Symbol | |
ID | 8535544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2546579 |
End bp | 2547949 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646384754 |
Product | Glutamate--putrescine ligase |
Protein accession | YP_003264236 |
Protein GI | 261856953 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0068155 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAGC GTAAAGACTT TTCTCACAAG GATATGGACC AGTGGCTGGC CGCGCACAAT GTCACGGAAA TCGAGTGTCT TGTTCCCGAT CTCACCGGCG TGGCGCGCGG CAAGATCCTG CCGCGGGAAA AGTTTACAGC CGAGCGCGCC ATGCGTCTCC CCGAAGCGGT TTTGGGTGTG ACGGTGACCG GTGAATCACC CGAAAACCGG CCGGCTTACG ACAATGTATT CGGCTTTACC GACAAGGATA TGGTGCTGGT TCCCGACCCC GGCACGGTTC GTTTGGTGCC CTGGGCGGTT GATCCCACGG CTCAGGTGAT CATGGATTGC CTGTTCCACG ATGGCACCCC GGTGGACTTT GCGCCACGCA ACGTGCTGCG CAAGGTGACC GAGTTGTACA AAAGCATGGG CTGGTCGCCG ATCGTGGCCC CCGAGTTGGA GTTCTACCTG TTGGCGCGAA ATACCGATCC CAACCAACCG CTGGTGCCGC CGATCGGCCG CAGTGGCCGC GCGGAAACCA GTCGTCAGCT GTACAGCATC GATGCGGTGA ATGAATTCGA TCCGCTGTTC GAGGAAATCT ACGAGTACTG CGACATCATG GGGCTGGAAC TCGATACGCT GATTCACGAA TTCGGTGCCG GTCAGATGGA AATCAATTTC CTGCACGACG ACCCCATGGT TCTTGCCGAC AAGGTGTTCT TCTTCAAGCG CACGCTGCGT GAAGCGGCAC TGCGTCACAA CATGTATGCC ACCTTCATGG CCAAGCCGAT GGCCAACGAG CCCGGCTCGG CCATGCATAT CCATCAGAGC GTCCTCGATA CCGGTACCGG CCAGAATATT TTCAGCAATC CGGATGGCAG TGAATCGCCA TTGTTCCAGC AGTACATCGC CGGTCTGCAA AAATACCTGC CCGCCGCCAT GGCCCTGCTG GCGCCTTATG TGAACTCGTA TCGACGCATC GTGCGCGGTG GTGCCGCACC CATCAACATC GAGTGGGGTT ACGACAACCG CACCGTCGGC ATCCGCGTGC CGCATTCCGG GCCGGAAGCA CGCCGGGTCG AAAACCGGGT CGTGGGTGCC GATGCCAATC CTTATTTGGC TATGGCGGTC ACGCTTGCCT GTGGTTATCT CGGCATAGTC GAGAAATTAC AGCCAAGCGC CGTGACAACC GGCAGTGCTT ATGACTCGAA CTATCAATTG CCCAGAGAGC TCTCGGAAGC TCTGCGCCAA TTGGATGCAT CCAAGCCGCT GCGTGAAGTG CTGGGTGACA ACTTTATTGA TGTTTATGTG GCGGTTAAAG AAACCGAGCA TGAGGAATTC ATGCGTGTCA TCAGCCCGTG GGAACGCGAG CATCTGTTGA TGCACGTTTA A
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Protein sequence | MIERKDFSHK DMDQWLAAHN VTEIECLVPD LTGVARGKIL PREKFTAERA MRLPEAVLGV TVTGESPENR PAYDNVFGFT DKDMVLVPDP GTVRLVPWAV DPTAQVIMDC LFHDGTPVDF APRNVLRKVT ELYKSMGWSP IVAPELEFYL LARNTDPNQP LVPPIGRSGR AETSRQLYSI DAVNEFDPLF EEIYEYCDIM GLELDTLIHE FGAGQMEINF LHDDPMVLAD KVFFFKRTLR EAALRHNMYA TFMAKPMANE PGSAMHIHQS VLDTGTGQNI FSNPDGSESP LFQQYIAGLQ KYLPAAMALL APYVNSYRRI VRGGAAPINI EWGYDNRTVG IRVPHSGPEA RRVENRVVGA DANPYLAMAV TLACGYLGIV EKLQPSAVTT GSAYDSNYQL PRELSEALRQ LDASKPLREV LGDNFIDVYV AVKETEHEEF MRVISPWERE HLLMHV
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