| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2376 |
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| Symbol | |
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| ID | 8535540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2542627 |
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| End bp | 2543739 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646384750 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_003264232 |
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| Protein GI | 261856949 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0669112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCGG TAACGGCCAC GACAGATCAG GATGTCTTAT TGAAAATTGA TGGCGTCAGC
AAGGTCTTCG ACGGTGTCGT AAAGGCGGTT GATAATGTTT CTCTGACGGT GCCCAAAGGC
AAGATTTTTG CCCTTGTCGG CAGTTCGGGC TGCGGCAAAT CAACCTTGCT CAGGATGCTG
GCCGGGTTCG AAACACCGAC GAGCGGCCGA ATTTATCTCT CCGGACAAGA CATTACCGAC
CTATCCCCAT ATGAACGGCC GGTCAACATG ATGTTTCAGT CCTATGCGCT TTTCCCCCAT
CTGAGCGTTT GGGACAACGT GGCATTCGGC CTGCGGCGCG ATGGACTCAA GGGCGCGGAG
CTCAACGAGC GCGTCAATGC CATGCTCAAT CTCGTTCAGC TGTCCAAGTA CGGTAAGCGC
AAACCCCATC AATTGTCTGG CGGCCAGCAA CAGCGGGTCG CCCTGGCGCG CAGTCTGGCC
AAGCGGCCCA CCCTCCTGCT GCTTGACGAA CCACTCGGTG CGCTTGACAA GAAGCTGCGG
GAAACCACGC AGTTCGAATT GGTCAACATT ATCGAACAGG TAGGGGTTAC CTGTGTTCTG
GTGACGCATG ATCAGGAAGA AGCGATGACC ATGGCCTGCA GCATCGCGGT CATGGATGAG
GGAACACTGC TTCAGGTGGG CACACCGGAC GAGATTTACG AAACCCCCAA CAGCCGATTC
GTGGCAGGCT TTATTGGCAA TGTGAATATC TTCGAGGGCA AGGTCGACGA AGACGAGCCC
GATCACGTCA CCGTGCGCTG CCCGGAGTGT ACGCACTATG TGGGCCATGG CATATCCGGG
ACATCGGGCA TGGACGTCGC CGGCGCCCTT CGCCCGGAGA AAATCCAGCT CTCCAAGGAA
AAGCCAGAGG CCAAATACAA CTGGTGTGAA GGCGAGGTGG TCGAAATGGC TTATTTCGGT
GCGCACACAA CGTATCACCT CAAGTTGGCC AGTGGCATGA TCCTAAAGGC CCAAGAAATA
AACATTACCC GGGATTTGAG TTGTGGCCTG ACTTGGGGTG ATCGTGCATA TGCCCAGTGG
GACAATCTGG CCATGGTTGT ACTGACGGAA TAA
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| Protein sequence | MASVTATTDQ DVLLKIDGVS KVFDGVVKAV DNVSLTVPKG KIFALVGSSG CGKSTLLRML
AGFETPTSGR IYLSGQDITD LSPYERPVNM MFQSYALFPH LSVWDNVAFG LRRDGLKGAE
LNERVNAMLN LVQLSKYGKR KPHQLSGGQQ QRVALARSLA KRPTLLLLDE PLGALDKKLR
ETTQFELVNI IEQVGVTCVL VTHDQEEAMT MACSIAVMDE GTLLQVGTPD EIYETPNSRF
VAGFIGNVNI FEGKVDEDEP DHVTVRCPEC THYVGHGISG TSGMDVAGAL RPEKIQLSKE
KPEAKYNWCE GEVVEMAYFG AHTTYHLKLA SGMILKAQEI NITRDLSCGL TWGDRAYAQW
DNLAMVVLTE
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