Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2375 |
Symbol | |
ID | 8535539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2541698 |
End bp | 2542612 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646384749 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003264231 |
Protein GI | 261856948 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.113051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTCA AATCCATCGT TCCCTGGCTT CAGGGTGTTT TCACCACCCG CAATCTGGTG ATCGGCATCC CGATGATCTG GCTGTTCGCC CTGGCGGCCG CCCCCCTCCT GCTTGTTCTG GATATCAGTC TGGCTCACAT GGACGTCACC TCGGTGTCCA GCCTGTGGCA GTGGGCCGAT GACGAACTGA CGCTGAAGTT CAATTTCGGC AACTACCTGT ACCTTGGTCA GGACTCGCTT TATTTCGATA CGTATTTCTC TTCGTTGAAA TTCGCGGCGA TAACCACCTT GTACTGTCTG ATCGTGGGTT ATCCGTTCGC GTATTTCATC TCGCGTGCCC CGGCGCATCT GCGTACTGTG CTGCTGATGC TGGTCATGTT GCCGTTCTGG ACATCGTTTC TGCTGCGCAT TTATGCATGG AAAGCCCTGC TGGCGGACAA CGGCATCGTC AATAACGGAT TGATGGGGCT GGGTGTGATT GCCTCCCCGA TCCACATGAT GCACACCTCG TTTTCACTCA CCATCGGTAT GGTGTACGCC TATCTGCCGT TCATGGTGTT GCCGCTGTAC GCAACGCTGG TGAAACTGGA CGGGCGCATG CTCGAAGCGG CGGCCGATCT CGGGGCCAGT CCATTCAAGA CCTTCTGGCT GGTCACCGTA CCGCTGACCA AGCGCGGCAT CATCGCCGGT TCGCTTTTGG TGTTCATCCC GGCGTTCGGT GAATACGTGA TTCCCGAGTT GCTCGGCGGT GCGCGCACAC TCATGATTGC CCGCGTCCTG TGGGATGAGT TCTTCAGCAA CAACGATTGG CCCATGGCCT CTGCCGTCAC CATCGTGATG ATCCTGCTCA TTCTCGTGCC CATGGCCTTG TTCAATCGTT ACAACGATGA AACCAGACTG GGAGAGAAAT CATGA
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Protein sequence | MRLKSIVPWL QGVFTTRNLV IGIPMIWLFA LAAAPLLLVL DISLAHMDVT SVSSLWQWAD DELTLKFNFG NYLYLGQDSL YFDTYFSSLK FAAITTLYCL IVGYPFAYFI SRAPAHLRTV LLMLVMLPFW TSFLLRIYAW KALLADNGIV NNGLMGLGVI ASPIHMMHTS FSLTIGMVYA YLPFMVLPLY ATLVKLDGRM LEAAADLGAS PFKTFWLVTV PLTKRGIIAG SLLVFIPAFG EYVIPELLGG ARTLMIARVL WDEFFSNNDW PMASAVTIVM ILLILVPMAL FNRYNDETRL GEKS
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