| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2356 |
|---|
| Symbol | |
|---|
| ID | 8535520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2522157 |
|---|
| End bp | 2523464 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646384730 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_003264212 |
|---|
| Protein GI | 261856929 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATT TTAAAATCAA GCCTAGCTTC GGGCTGGGCA TGCTGGCGAT TATCGGCCTG
CTGATGTCAA CAGGCGCCTC GGCAGAAGAT GCCAAACCCG TTCTGGATGC GGGCAACACC
TCATGGATGT TGACCTCTAC GGCACTGGTT CTGTTAATGA CCATTCCGGG CGTAGCGCTG
TTCTACGGCG GTATGGTTCG TCGTAAAAAC TTGTTGTCCG TCGCAGCGGC CACATTTGCC
ACGACGGCCA TGATCAGCGT GATCTGGGCA GTGGTGGGTT ACTCGCTGGC CTTCAAAGGC
AGCGGCGCCT ATGTGGGTGA CTTCAGCGCC TTGTTCCTCA AGGGCATGGG TTATGACAGC
ATCCAAGGCA CCATTCCGGA AAGTGTCTTT ATGACCTTCC AGATGACCTT CGCCATCATT
ACACCTGCGC TGATCATCGG TGCTGTTGTT GAACGGATGA AGTTCTCCGC ATTGCTGATC
TTCCTTGGCC TCTGGTCCGT GTTGGTGTAT TCACCTATTG CGCACATGGT TTGGGGCGGT
GGCTGGCTTG CCGGAGACGG TATCCAGGAT TTTGCCGGTG GTACCGTGGT ACACATCAAC
GCCGGTATCG CTGGTCTGGT CGCTGCACTG GTATTGGGCA AGCGCAAAGG CTACGGCACT
GAGGCCATGC CGCCGGTTAA CCTGGTGTAT ACCATGGCCG GTGCCGCCCT TCTGTGGGTG
GGCTGGTTTG GCTTCAACGC CGGTTCTGAA CTGGCTGCCG ATGGTACTGC GGGCATGGCG
ATGGCCGTTA CCCAGATTGC AACAGCCGTT GCTGCAATGG CATGGATGTT GATCGAATGG
ATCATGCGCG GCAAACCCAC TCTGTTGGGT ATGGCCTCCG GTGCGGTTGC GGGCTTAGTT
GCCATCACCC CCGCCTCGGG TTTTGTCGGC CCAACCGGTG CGTTTGTGAT TGGTATCGCA
GCCGGTATCA TCCCGTTCCT CGCCGCGGTC TACCTTAAGC GGATGCTGGG TTATGACGAC
TCGCTCGATG CCTTCGGCGT GCATGCGATA GGCGGTATTG TGGGTGCCTT GTTGACCGGT
ATCTTCTCTG CGGCCGCTTT CGGTGGCGCC GGTTTGAATG CCGCTGCCAA CGGCAGCATC
CTGGCTCAGT TCATGATTCA GCTCAAGGGT GTTGGCTTCA CTGTTGTCTA TGATGCGGTG
GTTACCTTCC TCATCTTGAT GGCACTGAAA TTCACGATTG GTATTCGGGT TACGGAAGAA
GAAGAAGCCG AAGGTCTGGA TATCAACCAG CATGGTGAAC GGGTTTAA
|
|---|
| Protein sequence | MSNFKIKPSF GLGMLAIIGL LMSTGASAED AKPVLDAGNT SWMLTSTALV LLMTIPGVAL
FYGGMVRRKN LLSVAAATFA TTAMISVIWA VVGYSLAFKG SGAYVGDFSA LFLKGMGYDS
IQGTIPESVF MTFQMTFAII TPALIIGAVV ERMKFSALLI FLGLWSVLVY SPIAHMVWGG
GWLAGDGIQD FAGGTVVHIN AGIAGLVAAL VLGKRKGYGT EAMPPVNLVY TMAGAALLWV
GWFGFNAGSE LAADGTAGMA MAVTQIATAV AAMAWMLIEW IMRGKPTLLG MASGAVAGLV
AITPASGFVG PTGAFVIGIA AGIIPFLAAV YLKRMLGYDD SLDAFGVHAI GGIVGALLTG
IFSAAAFGGA GLNAAANGSI LAQFMIQLKG VGFTVVYDAV VTFLILMALK FTIGIRVTEE
EEAEGLDINQ HGERV
|
|---|
| |