Gene Hneap_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2354 
Symbol 
ID8535518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2521431 
End bp2521985 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content57% 
IMG OID646384728 
ProductDJ-1 family protein 
Protein accessionYP_003264210 
Protein GI261856927 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0457203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTA AGGCTATGAT CCTGTTGGCG CCGGGCTTTG AGGATCTCGA AGCGGTGACC 
ATCATCGATA TACTGCGCCG TGCGAAATTT CAGGTTGCGG TGATCAGCCT GCGGGAGGAT
GAAGTCACCG GGACCCGCGG AACCCGAATC GTTACCGATG GCAACCTCGC CTTGCTCGAT
AAACAGGCAG CGTTTGATCT CATCGTCATG CCAGGTGGAC AACCCGGCTC AGACAACCTG
GTGGCCGACC CGCGCGTGAT CAATCTGCTC AAGACGCAGA CTTCGGCTGG TCGCTTTGTG
GCTGCGTTAT GTGCCGCCCC AAAAGTATTG GCGAAGGCCG GTCTGATCAA GAATAAACGA
ATCACCCATT ACCCAGGTGC GTTGACGGCG GCAGAACAGC AAGGCGCAAC CGTCACCGAA
AACCTGGTAG AAGTGGATGG CAAACTGATT ACCGGCCGAA GCCCGGGTGC GGCCATGGAC
TTTGCCCTGA TGCTGATCGA GCAATTGGGC GGCCACGAAC TTCGCCAGAC AATCGAGACT
GATCTGGTGC GCTGA
 
Protein sequence
MSIKAMILLA PGFEDLEAVT IIDILRRAKF QVAVISLRED EVTGTRGTRI VTDGNLALLD 
KQAAFDLIVM PGGQPGSDNL VADPRVINLL KTQTSAGRFV AALCAAPKVL AKAGLIKNKR
ITHYPGALTA AEQQGATVTE NLVEVDGKLI TGRSPGAAMD FALMLIEQLG GHELRQTIET
DLVR