Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2353 |
Symbol | |
ID | 8535517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2519937 |
End bp | 2521277 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646384727 |
Product | carboxyl-terminal protease |
Protein accession | YP_003264209 |
Protein GI | 261856926 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0201351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAGT GGTTACGTAA AACATCTGCC CTTGGCGTTG CCGCCGTTTT CGGGTTCTCT GTGGCGATTG CCGTTAACGC GCTTGCTGAC AAGGATCAGG CCACTGATTC CAACATTCCG CTGAGCGAAT TGCGCACATT CACCGATGTT TTAACACGCG TAAAAGCGGA CTATGTCGAC AATGTCACCG ACAAGACCCT GATGGACAAT GCCATTCGCG GCATGATCGA TCGCCTCGAC CCGCATTCGA ATTATCTCGA TAAGGCCGAG TTCAAGGATC TGCGGGAAAC CACAACCGGC AAATTCGGTG GCTTGGGATT ACAGGTCGGC ATGAAGGACA AGGTGATCAC CGTCATCTCG CCAATCGACG ACACCCCGGC CCAAAAAGCT GGTATTAAGG CCGGCGACAG GATCGTCAAG ATCAATGGTG AGTTCACCCA GGGTCTTGAC CTTGAGAAAG CAGTAAAACA GATGCGCGGC GACCCGGGCA CGAAAATCAC GCTGACACTG GTTCGCGATG GCGTCGACAA ACCGTTTGAC GTCACACTTG AGCGCGCCAT CATCAACGTC AAGTCGGTCA AGGCGCGCAT GCTTGATCCG AACTTCGGCT ATGTGCGCAT CGCCCAATTC CAGTCCGACA CGACAGAACA GTTGCATGAT GCGCTCAATC AACTGATCAA GGACAACGAC AACAAGCCAC TCAAAGGCTT GGTACTTGAT CTGCGCAACA ATCCCGGCGG CGTGCTTCAG GCAGCAGTCG GCGTGGTGGA TACCTTCGTC AACAAGGGTT TGATCGTATA TACCAAGGGT CGTGTCGAAG ATGCGCAGAT GAGCTTCAAG GCGCATGAGG GCGACATGCT CAACGGCGCC CCCATCGTGG TGTTGGTGAA CGGCGGCTCG GCGTCAGCAT CGGAAATCGT TGCCGGTGCT CTGCAAGATG ACAGCCGGGC ATTGATTGCC GGTGAACGCA CCTTCGGCAA GGGCTCGGTT CAGTCCATCA TGCCATTGAC CAATGGCGGG GCGCTGCGCC TGACCACGGC CCGCTACTTC ACGCCCTCGG GCCGCTCAAT TCAGGGCGAG GGCATCAAGC CGGACGTGGA AGTGCATCAG TTGAAAGTTA CCGATATCGA CAAGGTGTTC TCCATCAAGG AAGCTGATCT GGCCGGTCAC ATCAGCAACC CCACCAAGCC AGATCAAAAA CCGGCTACCC AGCCGATCAA GCAAATGATC GACTCCGACG GTAAGCCGTT GGTAGAAACC GATTATCAGC TCTACGAGGC ACTCAATCTA CTCAAGGGCA TGTCCATCGT GGCGCATCGA GATCGGGATT CCGCACAGTA A
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Protein sequence | MAQWLRKTSA LGVAAVFGFS VAIAVNALAD KDQATDSNIP LSELRTFTDV LTRVKADYVD NVTDKTLMDN AIRGMIDRLD PHSNYLDKAE FKDLRETTTG KFGGLGLQVG MKDKVITVIS PIDDTPAQKA GIKAGDRIVK INGEFTQGLD LEKAVKQMRG DPGTKITLTL VRDGVDKPFD VTLERAIINV KSVKARMLDP NFGYVRIAQF QSDTTEQLHD ALNQLIKDND NKPLKGLVLD LRNNPGGVLQ AAVGVVDTFV NKGLIVYTKG RVEDAQMSFK AHEGDMLNGA PIVVLVNGGS ASASEIVAGA LQDDSRALIA GERTFGKGSV QSIMPLTNGG ALRLTTARYF TPSGRSIQGE GIKPDVEVHQ LKVTDIDKVF SIKEADLAGH ISNPTKPDQK PATQPIKQMI DSDGKPLVET DYQLYEALNL LKGMSIVAHR DRDSAQ
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