| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2310 |
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| Symbol | |
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| ID | 8535474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2484019 |
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| End bp | 2485350 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646384685 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_003264167 |
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| Protein GI | 261856884 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCAATT TGGTCGCCAG ACGCAATAGG TATACACGCT GGTTGTTGGC GTTGTGGCTG
TTTTCCGTAC CCGTTTTTTC TGCTGATGCG CCCGCGTTGC CTGATGCGGT CACGATGTAT
GCAGGGCAAG CTTTGGTGAG GTCGGCACCG GGTTCGCTTC TTCGTGTCGC CGTTGGCAAT
GGCAAGCTGG TTGAGGTACG CGTTCTCGGA CGTCGGCAAA TGGTGATTAT TGCCAATCAA
GCGGGCGATA CCTCATTGCA GCTATGGATG CGGGATGGCA GTCGTCGCAG CATTGATTTG
CATATCGTGT CGGGCAATAC CGATCAGGTG GCGGAGCTAG TTCGCACACT GCTGAAAGCG
AGCAAAGCCG TATCTGTTAA TACAGTTGGT GGAAACGTTG TGTTAAGTGG GGTCAACCTG
ACTCAGGAGG ATGTTGCCCA GATTGCCGCG ATTAAAAAGG TTTACCCTCA GGTTCTTGAT
TTCACACAGG CCAATGCGGT GCAGATGAAA CCGATGGTCA TGATGAAAGT GCGCATCATG
GAATTCGACA AAAGCGCCCT GCATCAGATC GGTATTAAGT GGGATTCCGT GATCGATGGC
CCTGGCGGAG CGCTGGCCCA TGACTTTGCT TCGAATTCAC TGTATCGCAT GACACCCAGT
AGCTTCGGCG GTATCGGTGC GAATGGGGCT GTCAATTTGC CATTGTCCTT GTCAGGTACG
CCAGCCTTCT TTGGTTTGGT GACGTCTATC ACTTCGAAAA TCAATTTGAT GATGCAGACG
GGCAACGCCT GGGAGCTTGC TACACCGCAG CTGGCGGCAC GGAGCGGCGG AACGGCTGAT
TTCCTTGTCG GCGGGGAGGT GCCCATACCC ATTGCACAAG GTTTGGGGCA GACATCGGTT
GAGTACAAAC CTTATGGAAT CAAGCTTCAC ATCGAGCCCG TCGTCAGTAG TACGGGAGAT
ATTTCGACGA CGATCAAAGC GGAAATCAGT CACATCGATC CCAGTGTGAC CGTGCAGGGG
TACCCAGGAT TCCTGACTCG CAAAGCCAGC ACAGAAGTCA ATGTTCACGA AGGTCAGACC
ATCGTGATTT CGGGGTTGGT TGACTCTTCG GCATCAAAAA CAATCGATAA GGTGCCCGGG
TTGGGTCAAA TCCCCGTGCT TGGCGAGTTG TTTCGTTCGC GCGATTTCAA ATCGAAACGC
AGTGATCTTG TGATCTTTGT CACGCCCTAT CTTGTCACTC CGGATGCGCC TTTGAATAAG
GCGTTAATCA GCAAGAGCAA CAAGCTGGCC GATGAATTCC GTAAAACAGT CGGGAGCGAC
ATCCTGAACT GA
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| Protein sequence | MCNLVARRNR YTRWLLALWL FSVPVFSADA PALPDAVTMY AGQALVRSAP GSLLRVAVGN
GKLVEVRVLG RRQMVIIANQ AGDTSLQLWM RDGSRRSIDL HIVSGNTDQV AELVRTLLKA
SKAVSVNTVG GNVVLSGVNL TQEDVAQIAA IKKVYPQVLD FTQANAVQMK PMVMMKVRIM
EFDKSALHQI GIKWDSVIDG PGGALAHDFA SNSLYRMTPS SFGGIGANGA VNLPLSLSGT
PAFFGLVTSI TSKINLMMQT GNAWELATPQ LAARSGGTAD FLVGGEVPIP IAQGLGQTSV
EYKPYGIKLH IEPVVSSTGD ISTTIKAEIS HIDPSVTVQG YPGFLTRKAS TEVNVHEGQT
IVISGLVDSS ASKTIDKVPG LGQIPVLGEL FRSRDFKSKR SDLVIFVTPY LVTPDAPLNK
ALISKSNKLA DEFRKTVGSD ILN
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