| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2308 |
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| Symbol | |
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| ID | 8535472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2481445 |
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| End bp | 2482299 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646384683 |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003264165 |
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| Protein GI | 261856882 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCTG CGCTTTTGCC CCTCATCTTT GTCATTTTCT TCAGCATCAC CCTGTTGGGC
TTTGTGCTGG TGCGAAACGG GGTGATCTTC TGGGGAAAAT ATAAGCAACA GTTTACTGAG
CAGGCCAGTT ACAGCCTGGC CGACATGTTT CTTTTTCTGG ATGCGGCTCA TCTCTGGCGG
GTAAATCTTG TGGCATTGCT CGCGGTGCCG CTGTTGTTGT GGCTGACTAC CGACAATCCG
CTTCTGGTCG TGATCGCCAT CGTAGTCATC GCGATTTTTC CGAAAAAATT CTACGCATGG
TTGAAGCAAC GCCGGATCGA CAAGATCCAG CAACAACTGC CCGATGGCTT GATGATGGTG
TCTGGCAGCA TGCGGGCGGG GCTCGGTTTT ACCGCAGCAC TCGAAAGCCT GGCGCGTGAT
ACCGACCCGC CATTGGCGCA GGAATTCGCG CTGGTGCTCC GCGAGCAGCG CATGGGGGTG
AAGCTGGAAG ATGCCTTGCT GCATTTTAAC GACCGTGTGC CTGTTCAGGA CGTTACCTTG
TTTGTCTCTG CCGTGAATAT TTCCCGTGAA GTTGGCGGCA ACTTGGCAGA AAGCCTGACA
TCGCTCGCGA GTACGCTCCG TCGTCGTCTG ATCATGGAAG GCAAGGTCAA GTCACTGACT
GCGCAAGGTC GTCTTCAGGG GATCGTCATG GCATTGATGC CGGTCGGGTT ACTCACTTTT
CTCACGCTCG CCTATCCCGA CACCATGCAC GACCTTTATC ACACCCCATT GGGCTGGGGG
ATCATCGCCG TGGCCGTCGT GATGGAATAT CTCGGCTATC GGATGAGCCT CAAGATCGTG
ACCATCGACA TATGA
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| Protein sequence | MTSALLPLIF VIFFSITLLG FVLVRNGVIF WGKYKQQFTE QASYSLADMF LFLDAAHLWR
VNLVALLAVP LLLWLTTDNP LLVVIAIVVI AIFPKKFYAW LKQRRIDKIQ QQLPDGLMMV
SGSMRAGLGF TAALESLARD TDPPLAQEFA LVLREQRMGV KLEDALLHFN DRVPVQDVTL
FVSAVNISRE VGGNLAESLT SLASTLRRRL IMEGKVKSLT AQGRLQGIVM ALMPVGLLTF
LTLAYPDTMH DLYHTPLGWG IIAVAVVMEY LGYRMSLKIV TIDI
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