| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2307 |
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| Symbol | |
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| ID | 8535471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2480552 |
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| End bp | 2481448 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646384682 |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003264164 |
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| Protein GI | 261856881 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGA ATCTCATCAT TATTCTGGTC GGTGTGCTTA TCGCCGGTTC GGTCGGGATG
CTGTTCTGGG CATTGACAGG TTTCCTGCGC GATGTGCCGG AGGCGGATCG AAACTATCAG
GATCCGCTGC CGCTGGGGTT GCGTCTGATA TGGCCGTTGG TGAATGCCGC CACCTTTGTT
CTGGCGCCCA GATTATCACC GGATAAATTG GAAAAGGCGC ACCACACGCT GCAAACCGCT
GGGCAGGATT TCGTGCTGAA TCCGGAGCAA CTCTATGGTT TGCGGGTCGT CGGAGCGGGG
ATTGTTGTTG CATTTTTCTG GCTGATCCTG GCGATGCTCC ATAAGCAGAG TGCTTCGTTA
TTTGCGATGA CGCTGGTTCT CGGCGCCGTA CTGGGCTGGT TGTACCCGAG CCTATGGCTG
ACAGAGCGTC GCAAGCATCG TCAGCGGTTA GTCATCAAGG ATCTACCGGT TTTTCTCGAT
TTCATCGTCA TGGCGGTCGA AGCGGGGCTC AATATCACCG GTGGCATTGA ACAGGCGACC
TTGAAGGGCC CGAAGGGGCC GTTGGCACAA GAGTTCCGCC GTTTATTGCG CGATATGCGC
TCAGGACTTG CTCGTGCGGA AGCACTGAAA CGCATGGCCG AACGTATGGA TATGCCACAA
ATATCCAGTT TTACCGGCAC CTTGATTCAA GCCGATCGCG TCGGTGCCAG TCTCGGTGCC
AGCTTGCGGG TACAAGCCGA TCAGCGACGG GAAGAACGTT TTTTACGTGC CGAAAAACTG
GCACTGGAAG CGCCCGTCAA GATGATGCTA CCGCTCGTCA TGTTCTTCTT TCCGCTGATT
TTCTTGTTTC TCGCCTACTT CATCTACTTG CGGATGATTC AGGAAGGCAT CCTGTGA
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| Protein sequence | MNTNLIIILV GVLIAGSVGM LFWALTGFLR DVPEADRNYQ DPLPLGLRLI WPLVNAATFV
LAPRLSPDKL EKAHHTLQTA GQDFVLNPEQ LYGLRVVGAG IVVAFFWLIL AMLHKQSASL
FAMTLVLGAV LGWLYPSLWL TERRKHRQRL VIKDLPVFLD FIVMAVEAGL NITGGIEQAT
LKGPKGPLAQ EFRRLLRDMR SGLARAEALK RMAERMDMPQ ISSFTGTLIQ ADRVGASLGA
SLRVQADQRR EERFLRAEKL ALEAPVKMML PLVMFFFPLI FLFLAYFIYL RMIQEGIL
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