| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2221 |
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| Symbol | |
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| ID | 8535385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2390123 |
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| End bp | 2392504 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646384601 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003264083 |
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| Protein GI | 261856800 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0217178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGATA TGCCCCATTT TTCGCACGAT ACCTCAGCTT TTATTTACTT TTATATCAAT
GCGTTACGTG TTGGCAACAA ACTTGCTCAT GGGTCTGGCT TTCTTTTTAA CCAGCTCATA
AAACCAACAG TAACAGTCAC GATGAAATTC AAATTAAATC CGCTCGCGAT TCTGATTGCC
GCCGCCCCAT TGACGGCGTT TGCCGCAACC GAACTGCCGC CGGTTGAGGT CACCTCGACC
AAAGCGGCGA CCGTACCTGC CGGGGCCCAA GAACTCACCT CGGAACAAAT CAAGGCTGCC
CGGGCCGCGA CCAGCGATTC GGCCCGTCTG TTGGCCGATT TCCCCGGTGT GAACCTATTC
AGCGCGGGCG GTGTGTCTGC CCTGCCGATC ATTCATGGTC TTGCCGATGA TCGCCTGCGC
ACGCAGGTCG ATGGCATGGA TTTGATCGCC GCCTGCCCCA ATCATATGAA TTCGCCGCTG
TCGTACATCG ATCCGACCAA TGTCGGTCGG GTGCGTGTGT ATAGCGGCGT GGTGCCGGTT
TCCGTCGGCG GGGACAGCAT CGGCGGCACG ATTGCAGTCG ACTCGCCCGC GCCCGTCTTC
GCTCAGCCCG GCGAAGGCAC GATCACCCAA GGTGAAATCG GCGGGTTTTA CCGCAGCAAT
GGCAGCGCCT ATGGCGGCAA TCTGGCCGCG ACGCTGGCCA CGCGCAATTT CAGCCTGAGC
TATCGGGGTT CGAAGGCACA ATCCGACAAC TACAAGGCAG GCGGCGATTT CAAGCCGGGG
GGCCTGTCTT CCGCCGATCC GAAGGATATT TCCACCGGAA TCAGCCACTG GCTTGAAGGC
GACACGGTCG GCTCTTCGGC CTACAAATCG CAGAATCACG AACTGAGCGC CGCCTATCAA
AACGATGCGG GCACGCAGAT GGTCGAACTG GGTGTCGGCA TCCAGCGTAT TCCCTACGAG
AACTATCCCA ATCAGCGCAT GGACATGACG CAGAACAACA GCACGCAGTT CAACCTGCAT
TACAAGGGGC TGTACGACTG GGGCACGCTG GACGCCCGCG CCTATAATCA GCACGTGCGT
CATGAAATGG ACTTTAACGA CGACCGCCAG TTCTGGTACA TGACCGCGGC GGGCATGCCG
ATGAACACCG AAGGTAAGAA CACCGGCGCC AAGCTGCAAG CCAATATCGA TCTCACAACG
CGAGACGTTT TGAAGCTCGG CGCGGAATTG CAGAAATACC GCCTGGATGA CTGGTGGCCA
CCATCCGGCA CGGGCGGCAT GTCACCCGGC ACGTTCTGGA ACATCAACGA CGGCCAGCGC
GACCGCTTCG ACCTGTTTGC CGAATGGGAC GCGCACTGGA CGCCGCAATG GATGACGCAG
ATTGGCGTGC GCAGCGATAC CGTCCGCATG AATGCAGGCC CGGTTTCCGG TTACAGCACC
CAGATGGGCG TCACCAGCCA GAGTATGACA AGCTATGGGA TGACGGCCAA GGATGCCGCC
ACCTTCAATG CCAGCGACCG CGAAAAAACC GATCACAACC TCAACTTCAG CGCGCTGGCT
CGCTACACGC CGGATGCGAC CCAATCCTAC GAATTCGGCT TTGCGCGTCA GGCCCGCTCG
CCGAATCTGT ACGAGCGCTA CAGTTGGTCG ACCTGGCCGA TGGCTGCGAT CATGAATAAC
TTTGTCGGCG ACGGTAACGG CTATGTCGGC GACATCAACC TCAAGCCGGA AAAAGCCAAC
ACGATCAGCG CCACCGCCGA TTGGCACGAC GCAACCGGCC AGCAATGGGG CGTGAAAGTC
ACGCCGTACT ATTCCTATAT TCAGGATTAC ATCGACGCCC AGTGCCTGCC CGGCACAGTA
TGCAAAACAG GCCAGTTCAA CGTGCTGCAA TACGTAAATC AGAATGCACG CATCTATGGT
GCGGACTGGT CCGGTCATTA CCTGCTGGCC GAAACACAGA ACTTCGGGCG TTTCACTACT
ACAGGCATGG TCAGCTACAC GCACGGCAGG AACACCACCA CCGACGACAG CCTGTATAAC
GTGATGCCAT TGAATGCCAA ACTGGCACTG GTGCAGAACA TCGGTACGTG GCAAAACACC
GTGGAAACCG TCCTCGTCGC GGCGAAAACG GATGTCTCCA GCGTGCGCAG CGAACAGGAG
ACCGGCGGCT TTGCCCTCGT CAACCTGCGC ACCAGCTACA CCTGGAACAA ACTGCGCATC
GATGTGGGCA TCGACAACCT GTTCAACCGT TACTACGCCC TGCCCCAGGG CGGTGTTTAT
GTGGGTCAAG GCAAGACGAT GTCGATCAAT GGCGTTCCCT TCGGCGTGCC TGTTCCAGGC
CCGGGTCGCT CGATTTACAC CAGCCTGAAT TACAGCTTCT AA
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| Protein sequence | MGDMPHFSHD TSAFIYFYIN ALRVGNKLAH GSGFLFNQLI KPTVTVTMKF KLNPLAILIA
AAPLTAFAAT ELPPVEVTST KAATVPAGAQ ELTSEQIKAA RAATSDSARL LADFPGVNLF
SAGGVSALPI IHGLADDRLR TQVDGMDLIA ACPNHMNSPL SYIDPTNVGR VRVYSGVVPV
SVGGDSIGGT IAVDSPAPVF AQPGEGTITQ GEIGGFYRSN GSAYGGNLAA TLATRNFSLS
YRGSKAQSDN YKAGGDFKPG GLSSADPKDI STGISHWLEG DTVGSSAYKS QNHELSAAYQ
NDAGTQMVEL GVGIQRIPYE NYPNQRMDMT QNNSTQFNLH YKGLYDWGTL DARAYNQHVR
HEMDFNDDRQ FWYMTAAGMP MNTEGKNTGA KLQANIDLTT RDVLKLGAEL QKYRLDDWWP
PSGTGGMSPG TFWNINDGQR DRFDLFAEWD AHWTPQWMTQ IGVRSDTVRM NAGPVSGYST
QMGVTSQSMT SYGMTAKDAA TFNASDREKT DHNLNFSALA RYTPDATQSY EFGFARQARS
PNLYERYSWS TWPMAAIMNN FVGDGNGYVG DINLKPEKAN TISATADWHD ATGQQWGVKV
TPYYSYIQDY IDAQCLPGTV CKTGQFNVLQ YVNQNARIYG ADWSGHYLLA ETQNFGRFTT
TGMVSYTHGR NTTTDDSLYN VMPLNAKLAL VQNIGTWQNT VETVLVAAKT DVSSVRSEQE
TGGFALVNLR TSYTWNKLRI DVGIDNLFNR YYALPQGGVY VGQGKTMSIN GVPFGVPVPG
PGRSIYTSLN YSF
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